# Mapping of OMA species codes to NCBI taxon IDs and scientific names. # Note: OMA species codes are whenever possible identical to UniProt codes. # Format: OMA codeTaxon IDScientific nameGenome sourceVersion/Release ACAM1 329726 Acaryochloris marina (strain MBIC 11017) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 2) ACEP3 634452 Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 2) ACHLI 441768 Acholeplasma laidlawii (strain PG-8A) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 2) ACIAC 397945 Acidovorax avenae subsp. citrulli (strain AAC00-1) EBI 05-JAN-2007 (Rel. 90, Last updated, Version 1) ACIAD 62977 Acinetobacter sp. (strain ADP1) EBI 17-APR-2005 (Rel. 83, Last updated, Version 5) ACIB3 557600 Acinetobacter baumannii (strain AB307-0294) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 3) ACIB4 439481 Aciduliprofundum boonei (strain DSM 19572 / T469) Genome Reviews 13-JUL-2010 (Rel. 123, Last updated, Version 2) ACIB5 480119 Acinetobacter baumannii (strain AB0057) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 3) ACIBC 405416 Acinetobacter baumannii (strain ACICU) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 1) ACIBL 204669 Acidobacteria bacterium (strain Ellin345) EBI 08-MAY-2006 (Rel. 87, Last updated, Version 1) ACIBS 509170 Acinetobacter baumannii (strain SDF) Genome Reviews 23-SEP-2008 (Rel. 96, Last updated, Version 1) ACIBT 400667 Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) Genome Reviews 26-JUN-2007 (Rel. 76, Last updated, Version 3) ACIBY 509173 Acinetobacter baumannii (strain AYE) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) ACIC1 351607 Acidothermus cellulolyticus (strain ATCC 43068 / 11B) EBI 16-NOV-2006 (Rel. 89, Last updated, Version 2) ACIC5 240015 Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) Genome Reviews 16-JUN-2009 (Rel. 107, Last updated, Version 1) ACICJ 349163 Acidiphilium cryptum (strain JF-5) Genome Reviews 23-OCT-2007 (Rel. 82, Last updated, Version 2) ACIET 535289 Acidovorax ebreus (strain TPSY) Genome Reviews 30-NOV-2010 (Rel. 127, Last updated, Version 21) ACIF2 243159 Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 3) ACIF5 380394 Acidithiobacillus ferrooxidans (strain ATCC 53993) Genome Reviews 16-DEC-2008 (Rel. 100, Last updated, Version 2) ACIFD 525909 Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 2) ACIS3 666510 Acidilobus saccharovorans (strain DSM 16705 / VKM B-2471 / 345-15) Genome Reviews 30-NOV-2010 (Rel. 127, Last updated, Version 2) ACISJ 232721 Acidovorax sp. (strain JS42) EBI 05-JAN-2007 (Rel. 90, Last updated, Version 1) ACTMD 446462 Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 3) ACTP2 416269 Actinobacillus pleuropneumoniae serotype 5b (strain L20) Genome Reviews 26-JUN-2007 (Rel. 76, Last updated, Version 3) ACTP7 537457 Actinobacillus pleuropneumoniae serotype 7 (strain AP76) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 1) ACTPJ 434271 Actinobacillus pleuropneumoniae serotype 3 (strain JL03) Genome Reviews 29-APR-2008 (Rel. 90, Last updated, Version 1) ACTSZ 339671 Actinobacillus succinogenes (strain ATCC 55618 / 130Z) Genome Reviews 26-FEB-2008 (Rel. 87, Last updated, Version 2) ACYPI 7029 Acyrthosiphon pisum EnsemblGenomes Ensembl Metazoa v7; Acyr2; 27-NOV-2010 AEDAE 7159 Aedes aegypti Ensembl AaegL1; Ensembl v42; 26-NOV-2006 AERHH 380703 Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) EBI 30-NOV-2006 (Rel. 89, Last updated, Version 3) AERPE 56636 Aeropyrum pernix Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 74) AERS4 382245 Aeromonas salmonicida (strain A449) Genome Reviews 26-JUN-2007 (Rel. 76, Last updated, Version 3) AGABI 192523 Agaricus bisporus JGI v2.0 AGGAD 668336 Aggregatibacter actinomycetemcomitans serotype C (strain D11S-1) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 2) AGGAN 634176 Aggregatibacter aphrophilus (strain NJ8700) EBI 03-JUL-2009 (Rel. 101, Last updated, Version 1) AGRRK 311403 Agrobacterium radiobacter (strain K84 / ATCC BAA-868) Genome Reviews 07-JUL-2009 (Rel. 108, Last updated, Version 3) AGRT5 176299 Agrobacterium tumefaciens (strain C58 / ATCC 33970) Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) AGRVS 311402 Agrobacterium vitis (strain S4 / ATCC BAA-846) Genome Reviews 25-MAY-2010 (Rel. 121, Last updated, Version 14) AILME 9646 Ailuropoda melanoleuca Ensembl Ensembl 60; ailMel1; 27-OCT-2010 AKKM8 349741 Akkermansia muciniphila (strain ATCC BAA-835) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 2) ALCBS 393595 Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) Genome Reviews 03-OCT-2006 (Rel. 59, Last updated, Version 2) ALHEH 187272 Alkalilimnicola ehrlichei (strain MLHE-1) Genome Reviews 14-NOV-2006 (Rel. 62, Last updated, Version 1) ALIAD 521098 Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) Genome Reviews 22-DEC-2009 (Rel. 115, Last updated, Version 1) ALISL 316275 Aliivibrio salmonicida (strain LFI1238) Genome Reviews 16-DEC-2008 (Rel. 100, Last updated, Version 1) ALKMQ 293826 Alkaliphilus metalliredigens (strain QYMF) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 1) ALKOO 350688 Alkaliphilus oremlandii (strain OhILAs) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 1) ALTMD 314275 Alteromonas macleodii (strain DSM 17117 / Deep ecotype) Genome Reviews 14-OCT-2008 (Rel. 97, Last updated, Version 1) AMICL 572547 Aminobacterium colombiense (strain DSM 12261 / ALA-1) Genome Reviews 05-OCT-2010 (Rel. 125, Last updated, Version 2) AMOA5 452471 Amoebophilus asiaticus (strain 5a2) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 1) ANAD2 455488 Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 12) ANADE 290397 Anaeromyxobacter dehalogenans (strain 2CP-C) EBI 31-JAN-2006 (Rel. 86, Last updated, Version 2) ANADF 404589 Anaeromyxobacter sp. (strain Fw109-5) Genome Reviews 04-DEC-2007 (Rel. 84, Last updated, Version 3) ANAMM 234826 Anaplasma marginale (strain St. Maries) EBI 17-APR-2005 (Rel. 83, Last updated, Version 3) ANAPD 525919 Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1) Genome Reviews 03-NOV-2009 (Rel. 113, Last updated, Version 1) ANAPZ 212042 Anaplasma phagocytophilum (strain HZ) EBI 22-FEB-2006 (Rel. 86, Last updated, Version 1) ANASK 447217 Anaeromyxobacter sp. (strain K) Genome Reviews 14-OCT-2008 (Rel. 97, Last updated, Version 1) ANATD 521460 Anaerocellum thermophilum (strain DSM 6725 / Z-1320) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 2) ANAVT 240292 Anabaena variabilis (strain ATCC 29413 / PCC 7937) EBI 21-SEP-2005 (Rel. 85, Last updated, Version 1) ANOCA 28377 Anolis carolinensis Ensembl ENSEMBL 54; AnoCar1.0; 15-APR-2009 ANOGA 7165 Anopheles gambiae Ensembl Ensembl 46; AgamP3; 4-AUG-2007 APIME 7460 Apis mellifera Ensembl AMEL1.1; 21-FEB-2005 AQUAE 224324 Aquifex aeolicus Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) ARALY 59689 Arabidopsis lyrata EnsemblGenomes Ensembl Plants 3; Araly1; 21-SEP-2009 ARATH 3702 Arabidopsis thaliana NCBI NC_003070.5; GI:42592260; 04-NOV-2005 ARCB4 367737 Arcobacter butzleri (strain RM4018) Genome Reviews 15-JAN-2008 (Rel. 85, Last updated, Version 2) ARCFU 224325 Archaeoglobus fulgidus Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) ARCPA 572546 Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) Genome Reviews 25-MAY-2010 (Rel. 121, Last updated, Version 2) AROAE 76114 Azoarcus sp. (strain EbN1) EBI 17-APR-2005 (Rel. 83, Last updated, Version 5) ARTAT 290340 Arthrobacter aurescens (strain TC1) Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 3) ARTCA 452863 Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 2) ARTS2 290399 Arthrobacter sp. (strain FB24) EBI 03-NOV-2006 (Rel. 89, Last updated, Version 1) ASHGO 284811 Ashbya gossypii EBI 21-JUN-2005 (Rel. 84, Last updated, Version 4) ASPFU 5085 Aspergillus fumigatus EBI 27-JUL-2005 (Rel. 84, Last updated, Version 2) AYWBP 322098 Aster yellows witches'-broom phytoplasma (strain AYWB) EBI 19-MAY-2006 (Rel. 87, Last updated, Version 2) AZOC5 438753 Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 1) AZOPC 511995 Azobacteroides pseudotrichonymphae genomovar. CFP2 Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 5) AZOSB 62928 Azoarcus sp. (strain BH72) EBI 19-DEC-2006 (Rel. 90, Last updated, Version 1) AZOVD 322710 Azotobacter vinelandii (strain DJ / ATCC BAA-1303) EBI 28-JUN-2009 (Rel. 101, Last updated, Version 3) BACA2 326423 Bacillus amyloliquefaciens (strain FZB42) Genome Reviews 04-DEC-2007 (Rel. 84, Last updated, Version 2) BACAC 568206 Bacillus anthracis (strain CDC 684 / NRRL 3495) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 9) BACAH 412694 Bacillus thuringiensis (strain Al Hakam) EBI 28-NOV-2006 (Rel. 89, Last updated, Version 1) BACAN 261594 Bacillus anthracis Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 110) BACC0 405535 Bacillus cereus (strain AH820) Genome Reviews 22-DEC-2009 (Rel. 115, Last updated, Version 11) BACC1 222523 Bacillus cereus (strain ATCC 10987) NCBI NC_003909.8 GI:42779081 BACC2 405531 Bacillus cereus (strain G9842) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 3) BACC3 572264 Bacillus cereus (strain 03BB102) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 10) BACC4 405532 Bacillus cereus (strain B4264) Genome Reviews 07-JUL-2009 (Rel. 108, Last updated, Version 5) BACC7 405534 Bacillus cereus (strain AH187) Genome Reviews 16-JUN-2009 (Rel. 107, Last updated, Version 4) BACCN 315749 Bacillus cereus subsp. cytotoxis (strain NVH 391-98) Genome Reviews 26-FEB-2008 (Rel. 87, Last updated, Version 2) BACCQ 361100 Bacillus cereus (strain Q1) Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 13) BACCR 226900 Bacillus cereus (strain ATCC 14579 / DSM 31) Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) BACCZ 288681 Bacillus cereus (strain ZK) NCBI NC_006274.1 GI:52140164 BACFN 272559 Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) EBI 17-APR-2005 (Rel. 83, Last updated, Version 3) BACFR 295405 Bacteroides fragilis Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 100) BACHD 272558 Bacillus halodurans Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) BACHK 281309 Bacillus thuringiensis subsp. konkukian Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 106) BACLD 279010 Bacillus licheniformis (strain DSM 13 / ATCC 14580) EBI 17-APR-2005 (Rel. 83, Last updated, Version 4) BACP2 315750 Bacillus pumilus (strain SAFR-032) Genome Reviews 15-JAN-2008 (Rel. 85, Last updated, Version 2) BACSK 66692 Bacillus clausii (strain KSM-K16) EBI 16-APR-2005 (Rel. 83, Last updated, Version 4) BACSU 1423 Bacillus subtilis Genome Reviews 12-SEP-2005 (Rel. 35, Last updated, Version 40) BACTN 226186 Bacteroides thetaiotaomicron Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 110) BACV8 435590 Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 2) BACWK 315730 Bacillus weihenstephanensis (strain KBAB4) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 2) BARBK 360095 Bartonella bacilliformis (strain ATCC 35685 / KC583) Genome Reviews 20-MAR-2007 (Rel. 70, Last updated, Version 2) BARGA 634504 Bartonella grahamii (strain as4aup) EBI 25-JUN-2009 (Rel. 101, Last updated, Version 2) BARHE 38323 Bartonella henselae NCBI NC_005956.1 GI:49474831 BARQU 283165 Bartonella quintana Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 105) BART1 382640 Bartonella tribocorum (strain CIP 105476 / IBS 506) EBI 26-FEB-2008 (Rel. 94, Last updated, Version 3) BAUCH 374463 Baumannia cicadellinicola (subsp. Homalodisca coagulata) EBI 29-APR-2006 (Rel. 87, Last updated, Version 1) BDEBA 264462 Bdellovibrio bacteriovorus Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) BEII9 395963 Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 1) BEUC1 471853 Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) Genome Reviews 10-AUG-2010 (Rel. 124, Last updated, Version 15) BIFA0 442563 Bifidobacterium animalis subsp. lactis (strain AD011) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 12) BIFAA 367928 Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) EBI 20-JAN-2007 (Rel. 90, Last updated, Version 3) BIFAB 552531 Bifidobacterium animalis subsp. lactis (strain BB-12) Genome Reviews 15-JUN-2010 (Rel. 122, Last updated, Version 1) BIFAV 573236 Bifidobacterium animalis subsp. lactis (strain V9) Genome Reviews 02-NOV-2010 (Rel. 126, Last updated, Version 2) BIFDB 401473 Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) Genome Reviews 25-MAY-2010 (Rel. 121, Last updated, Version 3) BIFLB 580050 Bifidobacterium animalis subsp. lactis (strain Bl-04 / DGCC2908 / RB 4825 / SD5219) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 5) BIFLD 205913 Bifidobacterium longum (strain DJO10A) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 1) BIFLO 206672 Bifidobacterium longum Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 110) BLASB 331104 Blattabacterium sp. subsp. Blattella germanica (strain Bge) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 2) BLOFL 203907 Blochmannia floridanus Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) BLOPB 291272 Blochmannia pennsylvanicus (strain BPEN) EBI 05-AUG-2005 (Rel. 84, Last updated, Version 1) BOMMO 7091 Bombyx mori SilkDB v2.0 BORA1 360910 Bordetella avium (strain 197N) EBI 08-FEB-2006 (Rel. 86, Last updated, Version 2) BORAP 390236 Borrelia afzelii (strain PKo) Genome Reviews 14-NOV-2006 (Rel. 62, Last updated, Version 2) BORBR 518 Bordetella bronchiseptica Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) BORBU 224326 Borrelia burgdorferi Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 119) BORBZ 445985 Borrelia burgdorferi (strain ZS7) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 3) BORDL 412419 Borrelia duttonii (strain Ly) Genome Reviews 16-DEC-2008 (Rel. 100, Last updated, Version 2) BORGA 29519 Borrelia garinii Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 56) BORHD 314723 Borrelia hermsii (strain DAH) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 2) BORPA 257311 Bordetella parapertussis Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) BORPD 340100 Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) Genome Reviews 29-APR-2008 (Rel. 90, Last updated, Version 1) BORPE 520 Bordetella pertussis Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 117) BORRA 412418 Borrelia recurrentis (strain A1) Genome Reviews 16-DEC-2008 (Rel. 100, Last updated, Version 2) BORT9 314724 Borrelia turicatae (strain 91E135) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 1) BOTFB 332648 Botrytis cinerea BROAD Institute Release 1.0 BOVIN 9913 Bos taurus Ensembl Ensembl 50; Btau_4.0; 24-JUN-2008 BRAFD 446465 Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 2) BRAFL 7739 Branchiostoma floridae JGI Brafl1 BRAHW 565034 Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 7) BRAJA 224911 Bradyrhizobium japonicum Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) BRASB 288000 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Genome Reviews 10-JUL-2007 (Rel. 77, Last updated, Version 2) BRASO 114615 Bradyrhizobium sp. (strain ORS278) Genome Reviews 26-JUN-2007 (Rel. 76, Last updated, Version 1) BREBN 358681 Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) Genome Reviews 07-JUL-2009 (Rel. 108, Last updated, Version 2) BRUA1 430066 Brucella abortus (strain S19) Genome Reviews 23-SEP-2008 (Rel. 96, Last updated, Version 1) BRUA2 359391 Brucella abortus (strain 2308) EBI 22-NOV-2005 (Rel. 85, Last updated, Version 1) BRUAB 235 Brucella abortus EBI 06-APR-2005 (Rel. 83, Last updated, Version 1) BRUC2 483179 Brucella canis (strain ATCC 23365 / NCTC 10854) Genome Reviews 29-APR-2008 (Rel. 90, Last updated, Version 1) BRUMB 546272 Brucella melitensis biotype 2 (strain ATCC 23457) Genome Reviews 22-DEC-2009 (Rel. 115, Last updated, Version 6) BRUMC 568815 Brucella microti (strain CCM 4915) Genome Reviews 22-DEC-2009 (Rel. 115, Last updated, Version 2) BRUME 29459 Brucella melitensis Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 81) BRUO2 444178 Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 2) BRUSI 470137 Brucella suis (strain ATCC 23445 / NCTC 10510) EBI 02-JAN-2008 (Rel. 94, Last updated, Version 1) BRUSU 29461 Brucella suis NCBI NC_004310.1 GI:23500916 BUCA5 563178 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) Genome Reviews 16-JUN-2009 (Rel. 107, Last updated, Version 4) BUCAI 107806 Buchnera aphidicola subsp. Acyrthosiphon pisum Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 116) BUCAP 198804 Buchnera aphidicola subsp. Schizaphis graminum Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 119) BUCAT 561501 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 3) BUCBP 224915 Buchnera aphidicola subsp. Baizongia pistaciae Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 115) BUCCC 372461 Buchnera aphidicola subsp. Cinara cedri EBI 20-OCT-2006 (Rel. 89, Last updated, Version 1) BURA4 398577 Burkholderia ambifaria (strain MC40-6) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 2) BURCA 331271 Burkholderia cenocepacia (strain AU 1054) Genome Reviews 13-NOV-2007 (Rel. 83, Last updated, Version 23) BURCC 406425 Burkholderia cenocepacia (strain MC0-3) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) BURCH 331272 Burkholderia cenocepacia (strain HI2424) EBI 03-NOV-2006 (Rel. 89, Last updated, Version 1) BURCJ 216591 Burkholderia cepacia (strain J2315 / LMG 16656) EBI 23-OCT-2008 (Rel. 97, Last updated, Version 5) BURCM 339670 Burkholderia cepacia (strain ATCC 53795 / AMMD) EBI 22-SEP-2006 (Rel. 89, Last updated, Version 1) BURGB 626418 Burkholderia glumae (strain BGR1) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 6) BURM1 395019 Burkholderia multivorans (strain ATCC 17616 / 249) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 21) BURM7 320389 Burkholderia mallei (strain NCTC 10247) Genome Reviews 23-OCT-2007 (Rel. 82, Last updated, Version 2) BURM9 412022 Burkholderia mallei (strain NCTC 10229) Genome Reviews 23-OCT-2007 (Rel. 82, Last updated, Version 2) BURMA 13373 Burkholderia mallei Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 63) BURMS 320388 Burkholderia mallei (strain SAVP1) Genome Reviews 23-OCT-2007 (Rel. 82, Last updated, Version 2) BURP0 357348 Burkholderia pseudomallei (strain 1106a) Genome Reviews 26-JUN-2007 (Rel. 76, Last updated, Version 1) BURP1 320372 Burkholderia pseudomallei (strain 1710b) EBI 03-OCT-2005 (Rel. 85, Last updated, Version 1) BURP6 320373 Burkholderia pseudomallei (strain 668) Genome Reviews 15-JAN-2008 (Rel. 85, Last updated, Version 5) BURP8 391038 Burkholderia phymatum (strain DSM 17167 / STM815) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 2) BURPP 398527 Burkholderia phytofirmans (strain DSM 17436 / PsJN) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 1) BURPS 272560 Burkholderia pseudomallei Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 101) BURS3 269483 Burkholderia sp. (strain 383) EBI 21-OCT-2005 (Rel. 85, Last updated, Version 1) BURTA 271848 Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) EBI 06-JAN-2006 (Rel. 86, Last updated, Version 3) BURVG 269482 Burkholderia vietnamiensis (strain G4 / LMG 22486) Genome Reviews 23-OCT-2007 (Rel. 82, Last updated, Version 2) BURXL 266265 Burkholderia xenovorans (strain LB400) Genome Reviews 04-DEC-2007 (Rel. 84, Last updated, Version 24) CAEBE 135651 Caenorhabditis brenneri WormBase Wormbase WS203; June 29, 2009 CAEBR 6238 Caenorhabditis briggsae WormBase WS180; build CB3 CAEEL 6239 Caenorhabditis elegans Ensembl Ensembl 46; WS170; 4-AUG-2007 CAEJA 281687 Caenorhabditis japonica WormBase Wormbase WS196; 31-Oct-2008 CAERE 31234 Caenorhabditis remanei WormBase Wormbase WS203; June 29, 2009 CALJA 9483 Callithrix jacchus Ensembl Ensembl 56; calJac3; 20-AUG-2009 CALMQ 397948 Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 2) CALS8 351627 Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) Genome Reviews 23-OCT-2007 (Rel. 82, Last updated, Version 2) CAMC1 360104 Campylobacter concisus (strain 13826) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 2) CAMC5 360105 Campylobacter curvus (strain 525.92) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 2) CAMFF 360106 Campylobacter fetus subsp. fetus (strain 82-40) EBI 02-DEC-2006 (Rel. 90, Last updated, Version 2) CAMHC 360107 Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) Genome Reviews 04-DEC-2007 (Rel. 84, Last updated, Version 3) CAMJ8 407148 Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 2) CAMJD 360109 Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 2) CAMJE 192222 Campylobacter jejuni Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 109) CAMJJ 354242 Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) EBI 10-JAN-2007 (Rel. 90, Last updated, Version 1) CAMJR 195099 Campylobacter jejuni (strain RM1221) EBI 17-APR-2005 (Rel. 83, Last updated, Version 2) CAMLR 306263 Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) Genome Reviews 16-JUN-2009 (Rel. 107, Last updated, Version 3) CANAL 5476 Candida albicans EBI 12-JUN-2009 (Rel. 101, Last updated, Version 5) CANFA 9615 Canis familiaris Ensembl BROADD2; 27-NOV-2006; Ensembl v42 CANGA 5478 Candida glabrata EBI 16-DEC-2008 (Rel. 98, Last updated, Version 10) CAPI1 73382 Capitella sp. I JGI v1.0 CAPOD 521097 Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 2) CARHZ 246194 Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) EBI 22-OCT-2005 (Rel. 85, Last updated, Version 1) CARRP 387662 Carsonella ruddii (strain PV) Genome Reviews 03-APR-2007 (Rel. 71, Last updated, Version 1) CATAD 479433 Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 5) CAUCN 565050 Caulobacter crescentus (strain NA1000 / CB15N) Genome Reviews 13-OCT-2009 (Rel. 112, Last updated, Version 7) CAUCR 190650 Caulobacter crescentus Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) CAUSK 366602 Caulobacter sp. (strain K31) Genome Reviews 29-APR-2008 (Rel. 90, Last updated, Version 1) CAVPO 10141 Cavia porcellus Ensembl Ensembl 52; cavPor3; 22-NOV-2008 CELJU 498211 Cellvibrio japonicus (strain Ueda107) Genome Reviews 23-SEP-2008 (Rel. 96, Last updated, Version 1) CENSY 46770 Cenarchaeum symbiosum Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 3) CHICK 9031 Gallus gallus Ensembl WASHUC2; 28-NOV-2006 CHIPD 485918 Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 5) CHLAA 324602 Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 2) CHLAB 83555 Chlamydophila abortus EBI 11-MAY-2005 (Rel. 83, Last updated, Version 4) CHLAD 326427 Chloroflexus aggregans (strain MD-66 / DSM 9485) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 2) CHLCH 340177 Chlorobium chlorochromatii (strain CaD3) EBI 28-OCT-2005 (Rel. 85, Last updated, Version 1) CHLCV 227941 Chlamydophila caviae Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 116) CHLFF 264202 Chlamydophila felis (strain Fe/C-56) EBI 25-MAY-2006 (Rel. 87, Last updated, Version 2) CHLL2 290315 Chlorobium limicola (strain DSM 245 / NBRC 103803) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 1) CHLMU 83560 Chlamydia muridarum NCBI NC_002620.2 GI:29337300 CHLP8 517417 Chlorobaculum parvum (strain NCIB 8327) Genome Reviews 14-OCT-2008 (Rel. 97, Last updated, Version 2) CHLPB 331678 Chlorobium phaeobacteroides (strain BS1) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 1) CHLPD 290317 Chlorobium phaeobacteroides (strain DSM 266) EBI 10-FEB-2007 (Rel. 90, Last updated, Version 2) CHLPN 115713 Chlamydia pneumoniae Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 113) CHLPP 406984 Chlamydophila pneumoniae (strain LPCoLN) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 1) CHLSY 480224 Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) Genome Reviews 16-JUN-2009 (Rel. 107, Last updated, Version 3) CHLT2 471472 Chlamydia trachomatis (strain L2/434/Bu / ATCC VR902B) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) CHLT3 517418 Chloroherpeton thalassium (strain ATCC 35110 / GB-78) Genome Reviews 23-SEP-2008 (Rel. 96, Last updated, Version 1) CHLTA 315277 Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) EBI 30-SEP-2005 (Rel. 85, Last updated, Version 2) CHLTB 471473 Chlamydia trachomatis (strain L2b/UCH-1/proctitis) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) CHLTE 194439 Chlorobium tepidum Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 109) CHLTJ 580049 Chlamydia trachomatis (strain B/Jali20/OT) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 4) CHLTR 272561 Chlamydia trachomatis Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 117) CHOHO 9358 Choloepus hoffmanni Ensembl ENSEMBL 54; choHof1; 15-APR-2009 CHRSD 290398 Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) EBI 20-MAY-2006 (Rel. 87, Last updated, Version 3) CHRVO 243365 Chromobacterium violaceum Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) CIOIN 7719 Ciona intestinalis Ensembl Ensembl v59; JGI2; 16-JUL-2010 CIOSA 51511 Ciona savignyi Ensembl Ensembl v59; CSAV2.0; 15-JUL-2010 CITK8 290338 Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) Genome Reviews 15-JAN-2008 (Rel. 85, Last updated, Version 2) CITRI 637910 Citrobacter rodentium (strain ICC168) Genome Reviews 10-AUG-2010 (Rel. 124, Last updated, Version 6) CLAM3 443906 Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) Genome Reviews 02-OCT-2007 (Rel. 81, Last updated, Version 2) CLAMS 31964 Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) Genome Reviews 29-APR-2008 (Rel. 90, Last updated, Version 1) CLOAB 272562 Clostridium acetobutylicum Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 117) CLOB1 441770 Clostridium botulinum (strain ATCC 19397 / Type A) Genome Reviews 23-OCT-2007 (Rel. 82, Last updated, Version 2) CLOB6 515621 Clostridium botulinum (strain 657 / Type Ba4) Genome Reviews 25-MAY-2010 (Rel. 121, Last updated, Version 13) CLOB8 290402 Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 2) CLOBA 508767 Clostridium botulinum (strain Alaska E43 / type E3) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 2) CLOBB 508765 Clostridium botulinum (strain Eklund 17B / type B) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 2) CLOBH 441771 Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) Genome Reviews 23-OCT-2007 (Rel. 82, Last updated, Version 2) CLOBJ 536232 Clostridium botulinum (strain Kyoto / Type A2) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 10) CLOBK 498213 Clostridium botulinum (strain Okra / Type B1) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) CLOBL 441772 Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) Genome Reviews 23-OCT-2007 (Rel. 82, Last updated, Version 2) CLOBM 498214 Clostridium botulinum (strain Loch Maree / Type A3) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) CLOCE 394503 Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) EBI 15-JAN-2009 (Rel. 99, Last updated, Version 1) CLOD6 272563 Clostridium difficile (strain 630) EBI 20-SEP-2006 (Rel. 89, Last updated, Version 3) CLODR 645463 Clostridium difficile (strain R20291) EBI 21-APR-2010 (Rel. 104, Last updated, Version 4) CLOK5 431943 Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 2) CLONN 386415 Clostridium novyi (strain NT) EBI 30-NOV-2006 (Rel. 89, Last updated, Version 2) CLOP1 195103 Clostridium perfringens (strain ATCC 13124 / NCTC 8237) EBI 03-AUG-2006 (Rel. 88, Last updated, Version 2) CLOPE 195102 Clostridium perfringens Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) CLOPH 357809 Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 2) CLOPS 289380 Clostridium perfringens (strain SM101) EBI 03-AUG-2006 (Rel. 88, Last updated, Version 2) CLOTE 212717 Clostridium tetani Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 117) CLOTH 203119 Clostridium thermocellum (strain ATCC 27405 / DSM 1237) Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 2) COLP3 167879 Colwellia psychrerythraea (strain 34H / ATCC BAA-681) EBI 04-AUG-2005 (Rel. 84, Last updated, Version 2) COPPD 309798 Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) Genome Reviews 16-DEC-2008 (Rel. 100, Last updated, Version 2) CORA7 548476 Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) Genome Reviews 03-NOV-2009 (Rel. 113, Last updated, Version 5) CORDI 257309 Corynebacterium diphtheriae Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 119) COREF 152794 Corynebacterium efficiens NCBI NC_004369.1 GI:25026556 CORGB 340322 Corynebacterium glutamicum (strain R) Genome Reviews 26-JUN-2007 (Rel. 76, Last updated, Version 3) CORGL 196627 Corynebacterium glutamicum Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 112) CORJK 306537 Corynebacterium jeikeium (strain K411) EBI 27-JUL-2005 (Rel. 84, Last updated, Version 2) CORK4 645127 Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) Genome Reviews 22-DEC-2009 (Rel. 115, Last updated, Version 6) CORPF 765874 Corynebacterium pseudotuberculosis (strain FRC41) Genome Reviews 02-NOV-2010 (Rel. 126, Last updated, Version 1) CORU7 504474 Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) Genome Reviews 23-SEP-2008 (Rel. 96, Last updated, Version 1) COXB2 434923 Coxiella burnetii (strain CbuG_Q212) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 6) COXBN 434922 Coxiella burnetii (strain Dugway 5J108-111) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 2) COXBR 360115 Coxiella burnetii (strain RSA 331 / Henzerling II) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 2) COXBU 227377 Coxiella burnetii Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) CRYCD 469378 Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3) Genome Reviews 22-DEC-2009 (Rel. 115, Last updated, Version 3) CRYNE 5207 Cryptococcus neoformans EBI 15-FEB-2005 (Rel. 82, Last updated, Version 3) CRYPV 5807 Cryptosporidium parvum EBI 27-FEB-2007 (Rel. 90, Last updated, Version 1) CULQU 7176 Culex quinquefasciatus EnsemblGenomes Ensembl Metazoa v6; CpipJ1; 12-AUG-2010 CUPNH 381666 Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) EBI 30-AUG-2006 (Rel. 89, Last updated, Version 1) CUPPJ 264198 Ralstonia eutropha (strain JMP134) EBI 12-AUG-2005 (Rel. 84, Last updated, Version 1) CUPTR 164546 Cupriavidus taiwanensis (strain R1 / LMG 19424) Genome Reviews 04-NOV-2008 (Rel. 98, Last updated, Version 7) CYAA5 43989 Cyanothece (strain ATCC 51142) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 2) CYAP0 395962 Cyanothece sp. (strain PCC 8802) Genome Reviews 03-NOV-2009 (Rel. 113, Last updated, Version 1) CYAP4 395961 Cyanothece sp. (strain PCC 7425 / ATCC 29141) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 2) CYAP7 65393 Cyanothece sp. (strain PCC 7424) Genome Reviews 15-JUN-2010 (Rel. 122, Last updated, Version 17) CYTH3 269798 Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) EBI 12-JUL-2006 (Rel. 88, Last updated, Version 1) DANRE 7955 Danio rerio Ensembl Ensembl v57; Zv8; 2-FEB-2010 DAPPU 6669 Daphnia pulex JGI Frozen gene catalog, version 1.1 DASNO 9361 Dasypus novemcinctus Ensembl Ensembl v40; ARMA; 27-JUL-2006 DEBHA 4959 Debaryomyces hansenii EBI 10-SEP-2008 (Rel. 97, Last updated, Version 9) DECAR 159087 Dechloromonas aromatica (strain RCB) EBI 06-AUG-2005 (Rel. 84, Last updated, Version 1) DEFDS 639282 Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) Genome Reviews 10-AUG-2010 (Rel. 124, Last updated, Version 3) DEHE1 243164 Dehalococcoides ethenogenes (strain 195) EBI 25-AUG-2005 (Rel. 85, Last updated, Version 1) DEHSB 216389 Dehalococcoides sp. (strain BAV1) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 2) DEHSC 255470 Dehalococcoides sp. (strain CBDB1) EBI 20-OCT-2005 (Rel. 85, Last updated, Version 2) DEHSV 311424 Dehalococcoides sp. (strain VS) Genome Reviews 25-MAY-2010 (Rel. 121, Last updated, Version 4) DEIDV 546414 Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) Genome Reviews 07-JUL-2009 (Rel. 108, Last updated, Version 2) DEIGD 319795 Deinococcus geothermalis (strain DSM 11300) EBI 08-MAY-2006 (Rel. 87, Last updated, Version 1) DEIRA 243230 Deinococcus radiodurans Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) DELAS 398578 Delftia acidovorans (strain DSM 14801 / SPH-1) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 3) DESAA 439235 Desulfatibacillum alkenivorans (strain AK-01) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 2) DESAH 177437 Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) Genome Reviews 07-JUL-2009 (Rel. 108, Last updated, Version 2) DESAP 477974 Desulforudis audaxviator (strain MP104C) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 2) DESAS 485916 Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 4) DESDG 207559 Desulfovibrio desulfuricans (strain G20) EBI 29-OCT-2005 (Rel. 85, Last updated, Version 1) DESHD 272564 Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 7) DESHY 138119 Desulfitobacterium hafniense (strain Y51) EBI 28-JUN-2006 (Rel. 88, Last updated, Version 2) DESK1 490899 Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) Genome Reviews 16-JUN-2009 (Rel. 107, Last updated, Version 3) DESMR 573370 Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) Genome Reviews 15-JUN-2010 (Rel. 122, Last updated, Version 13) DESOH 96561 Desulfococcus oleovorans (strain DSM 6200 / Hxd3) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 3) DESPS 177439 Desulfotalea psychrophila Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 101) DESRM 349161 Desulfotomaculum reducens (strain MI-1) Genome Reviews 26-FEB-2008 (Rel. 87, Last updated, Version 1) DESVH 882 Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 110) DESVM 883 Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 13) DESVV 391774 Desulfovibrio vulgaris subsp. vulgaris (strain DP4) Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 3) DICDC 579405 Dickeya dadantii (strain Ech703) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 8) DICDI 44689 Dictyostelium discoideum dictyBase release-2-12; 08-30-2009 01:33 DICNV 246195 Dichelobacter nodosus (strain VCS1703A) Genome Reviews 10-JUL-2007 (Rel. 77, Last updated, Version 2) DICT6 309799 Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) Genome Reviews 16-DEC-2008 (Rel. 100, Last updated, Version 1) DICTD 515635 Dictyoglomus turgidum (strain Z-1310 / DSM 6724) Genome Reviews 16-JUN-2009 (Rel. 107, Last updated, Version 3) DICZE 561229 Dickeya zeae (strain Ech1591) Genome Reviews 22-DEC-2009 (Rel. 115, Last updated, Version 6) DINSH 398580 Dinoroseobacter shibae (strain DFL 12) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 1) DIPOR 10020 Dipodomys ordii Ensembl ENSEMBL 52; dipOrd1; 21-NOV-2008 DROGR 7222 Drosophila grimshawi EnsemblGenomes Ensembl Metazoa v5; dgri_r1.3_FB2008_07; 15-MAY-2010 DROME 7227 Drosophila melanogaster Ensembl Ensembl 46; BDGP 4.3; 5-AUG-2007 DROPS 46245 Drosophila pseudoobscura FlyBase Release 2.0; 11-Nov-05 DROVI 7244 Drosophila virilis EnsemblGenomes Ensembl Metazoa v5; dvir_r1.2_FB2008_07; 15-MAY-2010 DROWI 7260 Drosophila willistoni EnsemblGenomes Ensembl Metazoa 3; dwil_r1.3_FB2008_07; 20-AUG-2009 DYAFD 471854 Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 3) ECHTE 9371 Echinops telfairi Ensembl Ensembl 40; TENREC; 27-JUL-2006 ECO10 585395 Escherichia coli O103:H2 (strain 12009 / EHEC) EBI 26-OCT-2009 (Rel. 102, Last updated, Version 2) ECO24 331111 Escherichia coli O139:H28 (strain E24377A / ETEC) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 2) ECO27 574521 Escherichia coli O127:H6 (strain E2348/69 / EPEC) Genome Reviews 07-JUL-2009 (Rel. 108, Last updated, Version 3) ECO45 585055 Escherichia coli O45:K1 (strain S88 / ExPEC) Genome Reviews 16-JUN-2009 (Rel. 107, Last updated, Version 4) ECO55 585055 Escherichia coli (strain 55989 / EAEC) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 3) ECO57 155864 Escherichia coli O157:H7 Genome Reviews 23-MAR-2010 (Rel. 119, Last updated, Version 119) ECO5E 444450 Escherichia coli O157:H7 (strain EC4115 / EHEC) Genome Reviews 16-DEC-2008 (Rel. 100, Last updated, Version 1) ECO5T 544404 Escherichia coli O157:H7 (strain TW14359 / EHEC) Genome Reviews 22-DEC-2009 (Rel. 115, Last updated, Version 4) ECO7I 585055 Escherichia coli O7:K1 (strain IAI39 / ExPEC) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 3) ECO81 585055 Escherichia coli O81 (strain ED1a) Genome Reviews 16-JUN-2009 (Rel. 107, Last updated, Version 4) ECO8A 585055 Escherichia coli O8 (strain IAI1) Genome Reviews 07-JUL-2009 (Rel. 108, Last updated, Version 5) ECOBB 511693 Escherichia coli (strain B / BL21) Genome Reviews 13-OCT-2009 (Rel. 112, Last updated, Version 2) ECOBD 469008 Escherichia coli (strain B / BL21-DE3) Genome Reviews 15-JUN-2010 (Rel. 122, Last updated, Version 7) ECOBW 595496 Escherichia coli (strain K12 / BW2952) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 8) ECOD1 536056 Escherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1) Genome Reviews 10-AUG-2010 (Rel. 124, Last updated, Version 10) ECODH 316385 Escherichia coli (strain DH10B) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 2) ECOHS 331112 Escherichia coli O9:H4 (strain HS) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 2) ECOK1 405955 Escherichia coli O1:K1 / APEC EBI 05-OCT-2006 (Rel. 89, Last updated, Version 1) ECOL5 362663 Escherichia coli O6:K15:H31 (strain 536 / UPEC) Genome Reviews 23-MAR-2010 (Rel. 119, Last updated, Version 58) ECOL6 217992 Escherichia coli O6 Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 74) ECOLC 481805 Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) ECOLI 511145 Escherichia coli (strain K12) Genome Reviews 03-MAR-2009 (Rel. 103, Last updated, Version 107) ECOLU 585055 Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 3) ECOSE 409438 Escherichia coli (strain SE11) Genome Reviews 10-FEB-2009 (Rel. 102, Last updated, Version 2) ECOSM 439855 Escherichia coli (strain SMS-3-5 / SECEC) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) ECOUT 364106 Escherichia coli (strain UTI89 / UPEC) Genome Reviews 23-MAR-2010 (Rel. 119, Last updated, Version 61) EDWI9 634503 Edwardsiella ictaluri (strain 93-146) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 8) EHRCJ 269484 Ehrlichia canis (strain Jake) EBI 23-AUG-2005 (Rel. 84, Last updated, Version 2) EHRCR 205920 Ehrlichia chaffeensis (strain Arkansas) EBI 23-FEB-2006 (Rel. 86, Last updated, Version 1) EHRRG 302409 Ehrlichia ruminantium (strain Gardel) EBI 17-APR-2005 (Rel. 83, Last updated, Version 3) EHRRW 254945 Ehrlichia ruminantium (strain Welgevonden) EBI 17-APR-2005 (Rel. 83, Last updated, Version 3) ELUMP 445932 Elusimicrobium minutum (strain Pei191) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 1) EMENI 162425 Emericella nidulans EnsemblGenomes Ensembl Fungi v4; Eurofung Sep 2006; 17-FEB-2010 EMIHU 280463 Emiliania huxleyi CCMP1516 JGI v1.0 ENCCU 6035 Encephalitozoon cuniculi EBI 30-JUN-2009 (Rel. 101, Last updated, Version 6) ENT38 399742 Enterobacter sp. (strain 638) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 2) ENTFA 226185 Enterococcus faecalis Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) ENTS8 290339 Enterobacter sakazakii (strain ATCC BAA-894) Genome Reviews 04-DEC-2007 (Rel. 84, Last updated, Version 2) ERIEU 9365 Erinaceus europaeus Ensembl Ensembl 43; eriEur1; 20-FEB-2007 ERWCT 218491 Erwinia carotovora subsp. atroseptica Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 104) ERWT9 338565 Erwinia tasmaniensis (strain DSM 17950 / ET1/99) Genome Reviews 14-OCT-2008 (Rel. 97, Last updated, Version 1) ERYLH 314225 Erythrobacter litoralis (strain HTCC2594) EBI 12-JAN-2006 (Rel. 86, Last updated, Version 1) EUBE2 515620 Eubacterium eligens (strain ATCC 27750 / VPI C15-48) Genome Reviews 03-NOV-2009 (Rel. 113, Last updated, Version 4) EUBR3 515619 Eubacterium rectale (strain ATCC 33656 / VPI 0990) Genome Reviews 25-MAY-2010 (Rel. 121, Last updated, Version 12) EXIS2 262543 Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 2) EXISA 360911 Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 5) FELCA 9685 Felis catus Ensembl CAT; Ensembl 43; 21-FEB-2007 FERNB 381764 Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) Genome Reviews 26-FEB-2008 (Rel. 87, Last updated, Version 2) FERPA 589924 Ferroglobus placidus (strain DSM 10642 / AEDII12DO) Genome Reviews 13-JUL-2010 (Rel. 123, Last updated, Version 2) FIBSS 59374 Fibrobacter succinogenes (strain ATCC 19169 / S85) Genome Reviews 22-DEC-2009 (Rel. 115, Last updated, Version 1) FINM2 334413 Finegoldia magna (strain ATCC 29328) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) FLAB3 531844 Flavobacteriaceae bacterium (strain 3519-10) EBI 23-AUG-2009 (Rel. 101, Last updated, Version 2) FLAJ1 376686 Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) Genome Reviews 23-SEP-2008 (Rel. 96, Last updated, Version 10) FLAPJ 402612 Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 2) FRAAA 326424 Frankia alni (strain ACN14a) EBI 06-FEB-2007 (Rel. 90, Last updated, Version 4) FRAP2 484022 Francisella philomiragia subsp. philomiragia (strain ATCC 25017) Genome Reviews 29-APR-2008 (Rel. 90, Last updated, Version 1) FRASC 106370 Frankia sp. (strain CcI3) EBI 24-FEB-2006 (Rel. 86, Last updated, Version 3) FRASN 298653 Frankia sp. (strain EAN1pec) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 2) FRAT1 393115 Mycobacteriophage FRAT1 EBI 12-JUL-2006 (Rel. 88, Last updated, Version 1) FRATE 510831 Francisella tularensis subsp. tularensis (strain NE061598) Genome Reviews 25-MAY-2010 (Rel. 121, Last updated, Version 4) FRATF 458234 Francisella tularensis subsp. holarctica (strain FTA) Genome Reviews 04-NOV-2008 (Rel. 98, Last updated, Version 16) FRATH 376619 Francisella tularensis subsp. holarctica (strain LVS) EBI 02-MAR-2006 (Rel. 87, Last updated, Version 1) FRATM 441952 Francisella tularensis subsp. mediasiatica (strain FSC147) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 2) FRATN 401614 Francisella tularensis subsp. novicida (strain U112) EBI 30-NOV-2006 (Rel. 89, Last updated, Version 1) FRATO 393011 Francisella tularensis subsp. holarctica (strain OSU18) Genome Reviews 14-NOV-2006 (Rel. 62, Last updated, Version 1) FRATT 119856 Francisella tularensis (subsp. tularensis) EBI 15-APR-2005 (Rel. 83, Last updated, Version 5) FRATW 418136 Francisella tularensis subsp. tularensis (strain WY96-3418) Genome Reviews 26-JUN-2007 (Rel. 76, Last updated, Version 3) FUSNN 190304 Fusobacterium nucleatum subsp. nucleatum Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 108) GARV4 553190 Gardnerella vaginalis (strain 409-05) Genome Reviews 25-MAY-2010 (Rel. 121, Last updated, Version 2) GASAC 69293 Gasterosteus aculeatus Ensembl BROADS1; Ensembl 41; 25-SEP-2006 GEOBB 404380 Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) Genome Reviews 16-DEC-2008 (Rel. 100, Last updated, Version 2) GEOKA 1462 Geobacillus kaustophilus EBI BA000043.1; 06-DEC-2004 (Rel. 82, Last updated, Version 1) GEOLS 398767 Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 1) GEOMG 269799 Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) EBI 28-OCT-2005 (Rel. 85, Last updated, Version 1) GEOOG 526225 Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) Genome Reviews 15-JUN-2010 (Rel. 122, Last updated, Version 3) GEOS4 481743 Geobacillus sp. (strain Y412MC10) EBI 10-FEB-2010 (Rel. 103, Last updated, Version 1) GEOSF 316067 Geobacter sp. (strain FRC-32) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 12) GEOSL 243231 Geobacter sulfurreducens Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 112) GEOSM 443144 Geobacter sp. (strain M21) Genome Reviews 22-DEC-2009 (Rel. 115, Last updated, Version 6) GEOSW 471223 Geobacillus sp. (strain WCH70) Genome Reviews 13-OCT-2009 (Rel. 112, Last updated, Version 3) GEOSY 544556 Geobacillus sp. (strain Y412MC61) Genome Reviews 25-MAY-2010 (Rel. 121, Last updated, Version 7) GEOTN 420246 Geobacillus thermodenitrificans (strain NG80-2) Genome Reviews 26-JUN-2007 (Rel. 76, Last updated, Version 2) GEOUR 351605 Geobacter uraniumreducens (strain Rf4) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 2) GIALA 184922 Giardia lamblia GiardiaDB GiardiaDB 1.2 (14 July 2009) GLOVI 33072 Gloeobacter violaceus NCBI NC_005125.1 GI:37519569 GLUDA 272568 Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 1) GLUOX 442 Gluconobacter oxydans EBI 17-APR-2005 (Rel. 83, Last updated, Version 3) GORGO 9595 Gorilla gorilla Ensembl ENSEMBL 52; gorGor1; 26-NOV-2008 GRABC 391165 Granulobacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) Genome Reviews 14-NOV-2006 (Rel. 62, Last updated, Version 1) GRAFK 411154 Gramella forsetii (strain KT0803) EBI 06-NOV-2006 (Rel. 89, Last updated, Version 1) GUITH 55529 Guillardia theta (nucleomorph only) EBI 26-APR-2001 (Rel. 67, Last updated, Version 5) HAEDU 730 Haemophilus ducreyi NCBI NC_002940.2 GI:33151282 HAEI8 281310 Haemophilus influenzae (strain 86-028NP) EBI 14-JUL-2005 (Rel. 84, Last updated, Version 2) HAEIE 374930 Haemophilus influenzae (strain PittEE) Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 2) HAEIG 374931 Haemophilus influenzae (strain PittGG) Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 2) HAEIN 71421 Haemophilus influenzae Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) HAEPS 557723 Haemophilus parasuis serovar 5 (strain SH0165) Genome Reviews 16-JUN-2009 (Rel. 107, Last updated, Version 3) HAES1 205914 Haemophilus somnus (strain 129PT) Genome Reviews 14-NOV-2006 (Rel. 62, Last updated, Version 1) HAES2 228400 Haemophilus somnus (strain 2336) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) HAHCH 349521 Hahella chejuensis (strain KCTC 2396) EBI 15-DEC-2005 (Rel. 86, Last updated, Version 1) HALHL 349124 Halorhodospira halophila (strain DSM 244 / SL1) Genome Reviews 20-MAR-2007 (Rel. 70, Last updated, Version 2) HALLT 416348 Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) Genome Reviews 16-JUN-2009 (Rel. 107, Last updated, Version 3) HALMA 2238 Haloarcula marismortui EBI AY596297.1; 08-NOV-2004 (Rel. 81, Last updated, Version 2) HALMD 485914 Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) Genome Reviews 03-NOV-2009 (Rel. 113, Last updated, Version 1) HALOH 373903 Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 2) HALS3 478009 Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) Genome Reviews 29-APR-2008 (Rel. 90, Last updated, Version 1) HALSA 2242 Halobacterium salinarium Genome Reviews 20-JUN-2005 (Rel. 29, Last updated, Version 34) HALTV 543526 Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) Genome Reviews 25-MAY-2010 (Rel. 121, Last updated, Version 2) HALUD 519442 Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) Genome Reviews 03-NOV-2009 (Rel. 113, Last updated, Version 1) HALVD 309800 Haloferax volcanii (strain ATCC 29605 / DSM 3757 / IFO 14742 / NCIMB 2012 / DS2) Genome Reviews 13-JUL-2010 (Rel. 123, Last updated, Version 2) HALWD 362976 Haloquadratum walsbyi (strain DSM 16790) EBI 24-JUL-2006 (Rel. 88, Last updated, Version 2) HAMD5 572265 Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 5) HELAH 382638 Helicobacter acinonychis (strain Sheeba) EBI 14-NOV-2006 (Rel. 89, Last updated, Version 4) HELHP 235279 Helicobacter hepaticus Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) HELMI 498761 Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) HELP2 570508 Helicobacter pylori (strain P12) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 13) HELPB 592205 Helicobacter pylori (strain B38) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 6) HELPG 563041 Helicobacter pylori (strain G27) Genome Reviews 16-DEC-2008 (Rel. 100, Last updated, Version 1) HELPH 357544 Helicobacter pylori (strain HPAG1) EBI 01-JUL-2006 (Rel. 88, Last updated, Version 2) HELPJ 85963 Helicobacter pylori J99 Genome Reviews 04-JUL-2005 (Rel. 30, Last updated, Version 35) HELPS 512562 Helicobacter pylori (strain Shi470) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 1) HELPY 85962 Helicobacter pylori Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) HELRO 6412 Helobdella robusta JGI Version 1.0 HERA2 316274 Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 3) HERAR 204773 Herminiimonas arsenicoxydans Genome Reviews 10-JUL-2007 (Rel. 77, Last updated, Version 1) HIRBI 582402 Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) Genome Reviews 03-NOV-2009 (Rel. 113, Last updated, Version 2) HORSE 9796 Equus caballus Ensembl Ensembl v49; EquCab2; 23-FEB-2008 HUMAN 9606 Homo sapiens Ensembl Ensembl 55; GRCh37; 21-JUL-2009 HYDS0 380749 Hydrogenobaculum sp. (strain Y04AAS1) Genome Reviews 14-OCT-2008 (Rel. 97, Last updated, Version 1) HYPBU 415426 Hyperthermus butylicus (strain DSM 5456 / JCM 9403) Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 3) HYPNA 228405 Hyphomonas neptunium (strain ATCC 15444) Genome Reviews 14-NOV-2006 (Rel. 62, Last updated, Version 1) IDILO 135577 Idiomarina loihiensis EBI 15-APR-2005 (Rel. 83, Last updated, Version 4) IGNAA 583356 Ignisphaera aggregans strain (strain DSM 17230 / JCM 13409 / AQ1.S1) Genome Reviews 30-NOV-2010 (Rel. 127, Last updated, Version 1) IGNH4 453591 Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) Genome Reviews 13-NOV-2007 (Rel. 83, Last updated, Version 1) IXOSC 6945 Ixodes scapularis EnsemblGenomes Ensembl Metazoa release 2; IscaW1; 30-JUN-2009 JANMA 375286 Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis) Genome Reviews 02-OCT-2007 (Rel. 81, Last updated, Version 2) JANSC 290400 Jannaschia sp. (strain CCS1) EBI 02-MAR-2006 (Rel. 87, Last updated, Version 1) JONDD 471856 Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 1) KINRD 266940 Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 1) KLEP3 507522 Klebsiella pneumoniae (strain 342) Genome Reviews 16-DEC-2008 (Rel. 100, Last updated, Version 1) KLEP7 272620 Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) Genome Reviews 15-JAN-2008 (Rel. 85, Last updated, Version 2) KLULA 28985 Kluyveromyces lactis EBI 17-APR-2005 (Rel. 83, Last updated, Version 4) KOCRD 378753 Kocuria rhizophila (strain ATCC 9341 / NBRC 12708 / DC2201) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 1) KORCO 374847 Korarchaeum cryptofilum (strain OPF8) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) KYTSD 478801 Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 5) LACAC 1579 Lactobacillus acidophilus EBI 17-APR-2005 (Rel. 83, Last updated, Version 4) LACBA 387344 Lactobacillus brevis (strain ATCC 367 / JCM 1170) EBI 14-NOV-2006 (Rel. 89, Last updated, Version 4) LACBI 29883 Laccaria bicolor JGI Version 1.0 (May 22, 2006) LACC3 321967 Lactobacillus casei (strain ATCC 334) EBI 04-NOV-2006 (Rel. 89, Last updated, Version 3) LACCB 543734 Lactobacillus casei (strain BL23) Genome Reviews 23-SEP-2008 (Rel. 96, Last updated, Version 1) LACDA 390333 Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) EBI 14-JUN-2006 (Rel. 88, Last updated, Version 3) LACDB 321956 Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) EBI 04-NOV-2006 (Rel. 89, Last updated, Version 3) LACF3 334390 Lactobacillus fermentum (strain IFO 3956 / LMG 18251) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 1) LACGA 324831 Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) EBI 14-NOV-2006 (Rel. 89, Last updated, Version 4) LACH4 405566 Lactobacillus helveticus (strain DPC 4571) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 1) LACJO 257314 Lactobacillus johnsonii Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 117) LACLA 1360 Lactococcus lactis subsp. lactis Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 81) LACLM 416870 Lactococcus lactis subsp. cremoris (strain MG1363) Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 3) LACLS 272622 Lactococcus lactis subsp. cremoris (strain SK11) EBI 04-NOV-2006 (Rel. 89, Last updated, Version 3) LACPJ 644042 Lactobacillus plantarum (strain JDM1) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 2) LACPL 220668 Lactobacillus plantarum Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 117) LACRD 557436 Lactobacillus reuteri (strain DSM 20016) Genome Reviews 14-OCT-2008 (Rel. 97, Last updated, Version 12) LACRG 568703 Lactobacillus rhamnosus (strain ATCC 53103 / GG) EBI 02-OCT-2009 (Rel. 102, Last updated, Version 2) LACRJ 557433 Lactobacillus reuteri (strain JCM 1112) EBI 06-SEP-2008 (Rel. 97, Last updated, Version 3) LACRL 568704 Lactobacillus rhamnosus (strain Lc 705) Genome Reviews 10-AUG-2010 (Rel. 124, Last updated, Version 9) LACS1 362948 Lactobacillus salivarius subsp. salivarius (strain UCC118) EBI 04-MAY-2006 (Rel. 87, Last updated, Version 4) LACSS 314315 Lactobacillus sakei subsp. sakei (strain 23K) EBI 10-NOV-2005 (Rel. 85, Last updated, Version 3) LAMPA 30538 Lama guanicoe pacos Ensembl ENSEMBL 52; vicPac1; 24-NOV-2008 LARHH 557598 Laribacter hongkongensis (strain HLHK9) Genome Reviews 07-JUL-2009 (Rel. 108, Last updated, Version 1) LAWIP 363253 Lawsonia intracellularis (strain PHE/MN1-00) EBI 28-JUL-2006 (Rel. 88, Last updated, Version 2) LEGLN 661367 Legionella longbeachae serogroup 1 (strain NSW150) Genome Reviews 02-NOV-2010 (Rel. 126, Last updated, Version 5) LEGPA 297246 Legionella pneumophila (strain Paris) EBI 17-APR-2005 (Rel. 83, Last updated, Version 4) LEGPC 400673 Legionella pneumophila (strain Corby) Genome Reviews 02-OCT-2007 (Rel. 81, Last updated, Version 2) LEGPH 272624 Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152) EBI 15-APR-2005 (Rel. 83, Last updated, Version 2) LEGPL 297245 Legionella pneumophila (strain Lens) EBI 17-APR-2005 (Rel. 83, Last updated, Version 4) LEIBR 5660 Leishmania braziliensis EBI 28-JUN-2007 (Rel. 92, Last updated, Version 2) LEIIN 5671 Leishmania infantum EBI 03-JAN-2001 (Rel. 66, Last updated, Version 1) LEIMA 5664 Leishmania major EBI 16-JUL-2005 (Rel. 84, Last updated, Version 5) LEIXX 281090 Leifsonia xyli subsp. xyli Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 100) LEPBA 355278 Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) LEPBD 523794 Leptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249) Genome Reviews 25-MAY-2010 (Rel. 121, Last updated, Version 9) LEPBJ 355277 Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) EBI 18-NOV-2006 (Rel. 89, Last updated, Version 2) LEPBL 355276 Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) EBI 19-OCT-2006 (Rel. 89, Last updated, Version 1) LEPBP 456481 Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 2) LEPCP 395495 Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 2) LEPIC 267671 Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 112) LEPIN 189518 Leptospira interrogans Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) LEUCK 349519 Leuconostoc citreum (strain KM20) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) LEUMM 203120 Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) EBI 14-NOV-2006 (Rel. 89, Last updated, Version 5) LISIN 272626 Listeria innocua Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) LISM2 637381 Listeria monocytogenes serotype 1/2a (strain 08-5923) EBI 17-MAR-2010 (Rel. 104, Last updated, Version 2) LISMC 634178 Listeria monocytogenes serotype 4b (strain Clip81459) Genome Reviews 16-JUN-2009 (Rel. 107, Last updated, Version 1) LISMF 265669 Listeria monocytogenes (serotype 4b / strain F2365) NCBI NC_002973.5 GI:46906224 LISMH 552536 Listeria monocytogenes serotype 4a (strain HCC23) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 3) LISMO 169963 Listeria monocytogenes Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) LISW6 386043 Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) Genome Reviews 20-MAR-2007 (Rel. 70, Last updated, Version 2) LODEL 36914 Lodderomyces elongisporus BROAD Institute Release 1.0 LOTGI 225164 Lottia gigantea JGI Sbi1_4, Filtered Models LOXAF 9785 Loxodonta africana Ensembl Ensembl v57; Loxafr3.0; 2-FEB-2010 LYSSC 444177 Lysinibacillus sphaericus (strain C3-41) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 2) MACCJ 458233 Macrococcus caseolyticus (strain JCSC5402) Genome Reviews 07-JUL-2009 (Rel. 108, Last updated, Version 1) MACEU 9315 Macropus eugenii Ensembl ENSEMBL 55; Meug_1.0; 24-JUN-2009 MACMU 9544 Macaca mulatta Ensembl MMUL_1; Ensembl v41; 17-OCT-2006 MAGGR 148305 Magnaporthe grisea BROAD Institute Release 5.0 MAGSA 342108 Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) Genome Reviews 27-APR-2010 (Rel. 120, Last updated, Version 69) MAGSM 156889 Magnetococcus sp. (strain MC-1) EBI 14-NOV-2006 (Rel. 89, Last updated, Version 2) MANES 3983 Manihot esculenta JGI v1.1 MANSM 221988 Mannheimia succiniciproducens (strain MBEL55E) NCBI NC_006300.1 GI:52424055 MARAV 351348 Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) EBI 29-DEC-2006 (Rel. 90, Last updated, Version 1) MARMM 394221 Maricaulis maris (strain MCS10) Genome Reviews 14-NOV-2006 (Rel. 62, Last updated, Version 1) MARMS 400668 Marinomonas sp. (strain MWYL1) Genome Reviews 29-APR-2008 (Rel. 90, Last updated, Version 1) MEIRD 504728 Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) Genome Reviews 15-JUN-2010 (Rel. 122, Last updated, Version 1) MELGA 9103 Meleagris gallopavo Ensembl Ensembl 57; UMD2; 2-FEB-2010 MESFL 265311 Mesoplasma florum Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 103) MESSB 266779 Mesorhizobium sp. (strain BNC1) EBI 12-JUL-2006 (Rel. 88, Last updated, Version 1) META3 419665 Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) Genome Reviews 23-OCT-2007 (Rel. 82, Last updated, Version 1) METAC 188937 Methanosarcina acetivorans Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 110) METB6 456442 Methanoregula boonei (strain 6A8) Genome Reviews 23-OCT-2007 (Rel. 82, Last updated, Version 2) METBF 269797 Methanosarcina barkeri (strain Fusaro / DSM 804) EBI 06-OCT-2005 (Rel. 85, Last updated, Version 2) METBU 259564 Methanococcoides burtonii (strain DSM 6242) Genome Reviews 03-OCT-2006 (Rel. 59, Last updated, Version 2) METC4 440085 Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) EBI 24-DEC-2008 (Rel. 98, Last updated, Version 1) METCA 243233 Methylococcus capsulatus Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 100) METEA 272630 Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) EBI 13-AUG-2009 (Rel. 101, Last updated, Version 2) METED 661410 Methylobacterium extorquens (strain DSM 5838 / DM4) Genome Reviews 25-MAY-2010 (Rel. 121, Last updated, Version 10) METEP 419610 Methylobacterium extorquens (strain PA1) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 3) METEZ 644295 Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) Genome Reviews 30-NOV-2010 (Rel. 127, Last updated, Version 3) METFA 573064 Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) Genome Reviews 03-NOV-2009 (Rel. 113, Last updated, Version 1) METFK 265072 Methylobacillus flagellatus (strain KT / ATTC 51484 / DSM 6875) EBI 01-JUL-2006 (Rel. 88, Last updated, Version 2) METHJ 323259 Methanospirillum hungatei (strain JF-1 / DSM 864) EBI 18-FEB-2006 (Rel. 86, Last updated, Version 1) METI4 481448 Methylokorus infernorum (strain V4) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 1) METIM 573063 Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) Genome Reviews 30-NOV-2010 (Rel. 127, Last updated, Version 4) METJA 243232 Methanocaldococcus jannaschii Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 110) METKA 190192 Methanopyrus kandleri Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 110) METLZ 410358 Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 3) METM5 402880 Methanococcus maripaludis (strain C5 / ATCC BAA-1333) Genome Reviews 23-OCT-2007 (Rel. 82, Last updated, Version 1) METM6 444158 Methanococcus maripaludis (strain C6 / ATCC BAA-1332) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 3) METM7 426368 Methanococcus maripaludis (strain C7 / ATCC BAA-1331) Genome Reviews 04-DEC-2007 (Rel. 84, Last updated, Version 3) METMA 192952 Methanosarcina mazei Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) METMJ 368407 Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 1) METML 583345 Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) Genome Reviews 10-AUG-2010 (Rel. 124, Last updated, Version 13) METMP 39152 Methanococcus maripaludis Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 109) METMS 547558 Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) Genome Reviews 30-NOV-2010 (Rel. 127, Last updated, Version 4) METNO 460265 Methylobacterium nodulans (strain ORS2060 / LMG 21967) Genome Reviews 07-JUL-2009 (Rel. 108, Last updated, Version 3) METPB 441620 Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 2) METPE 521011 Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) Genome Reviews 16-JUN-2009 (Rel. 107, Last updated, Version 3) METPP 420662 Methylibium petroleiphilum (strain PM1) Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 3) METPS 304371 Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) Genome Reviews 25-MAY-2010 (Rel. 121, Last updated, Version 4) METRJ 426355 Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) METRM 634498 Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) Genome Reviews 13-JUL-2010 (Rel. 123, Last updated, Version 4) METS3 420247 Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 2) METS4 426117 Methylobacterium sp. (strain 4-46) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) METS5 399549 Metallosphaera sedula (strain ATCC 51363 / DSM 5348) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 2) METSB 395965 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) Genome Reviews 16-JUN-2009 (Rel. 107, Last updated, Version 3) METSD 582744 Methylovorus sp. (strain SIP3-4) Genome Reviews 13-OCT-2009 (Rel. 112, Last updated, Version 1) METSF 644281 Methanocaldococcus sp. (strain FS406-22) Genome Reviews 13-JUL-2010 (Rel. 123, Last updated, Version 2) METST 339860 Methanosphaera stadtmanae (strain DSM 3091) EBI 06-JAN-2006 (Rel. 86, Last updated, Version 1) METTH 187420 Methanobacterium thermoautotrophicum Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) METTM 79929 Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) Genome Reviews 30-NOV-2010 (Rel. 127, Last updated, Version 2) METTP 349307 Methanosaeta thermophila (strain DSM 6194 / PT) EBI 14-NOV-2006 (Rel. 89, Last updated, Version 2) METV3 456320 Methanococcus voltae (strain ATCC BAA-1334 / A3) Genome Reviews 30-NOV-2010 (Rel. 127, Last updated, Version 3) METVM 579137 Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) Genome Reviews 22-DEC-2009 (Rel. 115, Last updated, Version 1) METVS 406327 Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) Genome Reviews 04-DEC-2007 (Rel. 84, Last updated, Version 3) MICAN 449447 Microcystis aeruginosa (strain NIES-843) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) MICMU 30608 Microcebus murinus Ensembl Ensembl v48; micMur1; 27-NOV-2007 MONBE 81824 Monosiga brevicollis JGI v1.0 MONDO 13616 Monodelphis domestica Ensembl Ensembl 45; MonDom 5.0; 29-MAY-2007 MOOTA 264732 Moorella thermoacetica (strain ATCC 39073) EBI 24-FEB-2006 (Rel. 86, Last updated, Version 2) MOUSE 10090 Mus musculus Ensembl Ensembl v48; NCBI m37; 28-NOV-2007 MYCA1 243243 Mycobacterium avium (strain 104) EBI 13-DEC-2006 (Rel. 90, Last updated, Version 2) MYCA5 243272 Mycoplasma arthritidis (strain 158L3-1) Genome Reviews 23-SEP-2008 (Rel. 96, Last updated, Version 1) MYCA9 561007 Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) Genome Reviews 25-NOV-2008 (Rel. 99, Last updated, Version 2) MYCAP 347257 Mycoplasma agalactiae (strain PG2) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 2) MYCBO 1765 Mycobacterium bovis NCBI NC_002945.3 GI:31791177 MYCBP 410289 Mycobacterium bovis (strain BCG / Paris 1173P2) Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 3) MYCBT 561275 Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) Genome Reviews 10-AUG-2010 (Rel. 124, Last updated, Version 17) MYCCR 45361 Mycoplasma conjunctivae (strain ATCC 25834 / HRC/581 / NCTC 10147) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 5) MYCCT 340047 Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) EBI 22-FEB-2006 (Rel. 86, Last updated, Version 2) MYCGA 2096 Mycoplasma gallisepticum Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 81) MYCGE 2097 Mycoplasma genitalium Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 82) MYCGH 710128 Mycoplasma gallisepticum (strain R(high / passage 156)) Genome Reviews 15-JUN-2010 (Rel. 122, Last updated, Version 3) MYCGI 350054 Mycobacterium gilvum (strain PYR-GCK) EBI 01-NOV-2007 (Rel. 93, Last updated, Version 2) MYCGR 54734 Mycosphaerella graminicola JGI v2.0 MYCH2 295358 Mycoplasma hyopneumoniae (strain 232) EBI 15-APR-2005 (Rel. 83, Last updated, Version 3) MYCH7 262722 Mycoplasma hyopneumoniae (strain 7448) EBI 21-SEP-2005 (Rel. 85, Last updated, Version 2) MYCHJ 262719 Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) EBI 21-SEP-2005 (Rel. 85, Last updated, Version 2) MYCHP 2098 Mycoplasma hominis (strain ATCC 23114 / IFO 14850 / NCTC 10111 / PG21) Genome Reviews 15-JUN-2010 (Rel. 122, Last updated, Version 6) MYCLB 561304 Mycobacterium leprae (strain Br4923) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 2) MYCLE 272631 Mycobacterium leprae Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 117) MYCMM 216594 Mycobacterium marinum (strain ATCC BAA-535 / M) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 1) MYCMO 267748 Mycoplasma mobile Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 108) MYCMS 44101 Mycoplasma mycoides subsp. mycoides SC Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 74) MYCPA 262316 Mycobacterium paratuberculosis Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 119) MYCPE 272633 Mycoplasma penetrans Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) MYCPN 272634 Mycoplasma pneumoniae Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) MYCPU 272635 Mycoplasma pulmonis Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) MYCS2 246196 Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 3) MYCS5 262723 Mycoplasma synoviae (strain 53) EBI 13-AUG-2005 (Rel. 84, Last updated, Version 3) MYCSJ 164757 Mycobacterium sp. (strain JLS) EBI 28-FEB-2007 (Rel. 90, Last updated, Version 1) MYCSK 189918 Mycobacterium sp. (strain KMS) EBI 22-DEC-2006 (Rel. 90, Last updated, Version 1) MYCSS 164756 Mycobacterium sp. (strain MCS) Genome Reviews 14-NOV-2006 (Rel. 62, Last updated, Version 2) MYCTA 419947 Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 2) MYCTF 336982 Mycobacterium tuberculosis (strain F11) EBI 22-DEC-2006 (Rel. 90, Last updated, Version 2) MYCTU 83332 Mycobacterium tuberculosis Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 113) MYCUA 362242 Mycobacterium ulcerans (strain Agy99) EBI 05-FEB-2007 (Rel. 90, Last updated, Version 2) MYCVP 350058 Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) EBI 28-DEC-2006 (Rel. 90, Last updated, Version 1) MYOLU 59463 Myotis lucifugus Ensembl Ensembl 44; myoLuc1; 6-APR-2007 MYXXD 246197 Myxococcus xanthus (strain DK 1622) EBI 08-JUN-2006 (Rel. 88, Last updated, Version 1) NAKMY 479431 Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) Genome Reviews 10-AUG-2010 (Rel. 124, Last updated, Version 11) NANEQ 228908 Nanoarchaeum equitans Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 108) NATMM 547559 Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) Genome Reviews 13-JUL-2010 (Rel. 123, Last updated, Version 2) NATPD 348780 Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) EBI 18-OCT-2005 (Rel. 85, Last updated, Version 3) NATTJ 457570 Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 2) NAUPA 598659 Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 1) NEIG1 242231 Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) EBI 14-APR-2005 (Rel. 83, Last updated, Version 2) NEIG2 521006 Neisseria gonorrhoeae (strain NCCP11945) Genome Reviews 14-OCT-2008 (Rel. 97, Last updated, Version 1) NEIM0 374833 Neisseria meningitidis serogroup C (strain 053442) EBI 05-DEC-2007 (Rel. 94, Last updated, Version 1) NEIMA 65699 Neisseria meningitidis serogroup A Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 74) NEIMB 122586 Neisseria meningitidis serogroup B Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) NEIMF 272831 Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 3) NEIML 487 Neisseria meningitidis (strain alpha14) Genome Reviews 10-AUG-2010 (Rel. 124, Last updated, Version 12) NEMVE 45351 Nematostella vectensis JGI Nemve1 NEORI 434131 Neorickettsia risticii (strain Illinois) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 3) NEOSM 222891 Neorickettsia sennetsu (strain Miyayama) EBI 23-FEB-2006 (Rel. 86, Last updated, Version 1) NEUCR 5141 Neurospora crassa EnsemblGenomes Ensembl Fungi 4; EF 1; 17-FEB-2010 NITEC 335283 Nitrosomonas eutropha (strain C71) EBI 15-DEC-2006 (Rel. 90, Last updated, Version 2) NITEU 228410 Nitrosomonas europaea Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) NITHX 323097 Nitrobacter hamburgensis (strain X14 / DSM 10229) EBI 14-APR-2006 (Rel. 87, Last updated, Version 1) NITMS 436308 Nitrosopumilus maritimus (strain SCM1) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 3) NITMU 323848 Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) EBI 16-NOV-2005 (Rel. 85, Last updated, Version 1) NITOC 323261 Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) EBI 06-OCT-2005 (Rel. 85, Last updated, Version 1) NITSB 387092 Nitratiruptor sp. (strain SB155-2) Genome Reviews 02-OCT-2007 (Rel. 81, Last updated, Version 2) NITWN 323098 Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) EBI 14-SEP-2005 (Rel. 85, Last updated, Version 1) NOCFA 247156 Nocardia farcinica Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 99) NOCSJ 196162 Nocardioides sp. (strain BAA-499 / JS614) Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 3) NOSP7 63737 Nostoc punctiforme (strain ATCC 29133 / PCC 73102) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 2) NOSS1 103690 Nostoc sp. (strain PCC 7120 / UTEX 2576) Genome Reviews 30-NOV-2010 (Rel. 127, Last updated, Version 127) NOVAD 279238 Novosphingobium aromaticivorans (strain DSM 12444) Genome Reviews 04-NOV-2008 (Rel. 98, Last updated, Version 47) OCEIH 182710 Oceanobacillus iheyensis NCBI NC_004193.1 GI:23097455 OCHA4 439375 Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) Genome Reviews 04-DEC-2007 (Rel. 84, Last updated, Version 3) OCHPR 9978 Ochotona princeps Ensembl Ensembl v48; OchPri2.0; 27-NOV-2007 OENOB 203123 Oenococcus oeni (strain BAA-331 / PSU-1) EBI 04-NOV-2006 (Rel. 89, Last updated, Version 3) OLICO 504832 Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 5) ONYPE 262768 Onion yellows phytoplasma Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 117) OPITP 452637 Opitutus terrae (strain DSM 11246 / PB90-1) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 2) ORITB 357244 Orientia tsutsugamushi (strain Boryong) Genome Reviews 24-JUL-2007 (Rel. 78, Last updated, Version 1) ORITI 334380 Orientia tsutsugamushi (strain Ikeda) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 1) ORNAN 9258 Ornithorhynchus anatinus Ensembl OANA5; Ensembl 49; 20-FEB-2008 ORYLA 8090 Oryzias latipes Ensembl Ensembl v59; MEDAKA1; 15-JUL-2010 ORYSJ 39947 Oryza sativa Japonica Group EnsemblGenomes Ensembl Plants v7; MSU6; 27-NOV-2010 OSTLU 436017 Ostreococcus lucimarinus EBI 08-MAY-2007 (Rel. 91, Last updated, Version 2) OSTTA 70448 Ostreococcus tauri Genome Reviews 13-JUL-2010 (Rel. 123, Last updated, Version 15) OTOGA 30611 Otolemur garnettii Ensembl Ensembl 44; otoGar1; 6-APR-2007 PAESJ 324057 Paenibacillus sp. (strain JDR-2) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 4) PANTR 9598 Pan troglodytes Ensembl CHIMP2.1; Ensembl v41; 4-OCT-2006 PARD8 435591 Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 2) PARDP 318586 Paracoccus denitrificans (strain Pd 1222) EBI 14-DEC-2006 (Rel. 90, Last updated, Version 1) PARL1 402881 Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 2) PARUW 264201 Protochlamydia amoebophila (strain UWE25) Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 108) PASMU 272843 Pasteurella multocida Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) PECCP 561230 Pectobacterium carotovorum subsp. carotovorum (strain PC1) Genome Reviews 22-DEC-2009 (Rel. 115, Last updated, Version 6) PEDHC 121224 Pediculus humanus corporis EnsemblGenomes Ensembl Metazoa v5; PhumU1; 15-MAY-2010 PEDHD 485917 Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 3) PEDPA 278197 Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) EBI 04-NOV-2006 (Rel. 89, Last updated, Version 3) PELCD 338963 Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 36) PELLD 319225 Pelodictyon luteolum (strain DSM 273) EBI 28-OCT-2005 (Rel. 85, Last updated, Version 1) PELPB 324925 Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) Genome Reviews 16-DEC-2008 (Rel. 100, Last updated, Version 4) PELPD 338966 Pelobacter propionicus (strain DSM 2379) EBI 14-FEB-2007 (Rel. 90, Last updated, Version 3) PELTS 370438 Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 2) PELUB 198252 Pelagibacter ubique EBI 26-JUL-2005 (Rel. 84, Last updated, Version 1) PERMH 123214 Persephonella marina (strain DSM 14350 / EX-H1) Genome Reviews 13-OCT-2009 (Rel. 112, Last updated, Version 5) PETMO 403833 Petrotoga mobilis (strain DSM 10674 / SJ95) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 2) PHANO 13684 Phaeosphaeria nodorum BROAD Institute Release 1.0 PHEZH 450851 Phenylobacterium zucineum (strain HLK1) Genome Reviews 25-NOV-2008 (Rel. 99, Last updated, Version 2) PHOAA 291112 Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 3) PHOLL 243265 Photorhabdus luminescens subsp. laumondii Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) PHOPR 74109 Photobacterium profundum NCBI NC_006370.1 GI:54307237 PHYAS 59748 Phytoplasma australiense Genome Reviews 10-FEB-2009 (Rel. 102, Last updated, Version 2) PHYMT 37692 Phytoplasma mali (strain AT) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 3) PICST 4924 Pichia stipitis EBI 04-JUL-2007 (Rel. 92, Last updated, Version 3) PICTO 263820 Picrophilus torridus Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 99) PIGXX 9823 Sus scrofa Ensembl Ensembl 56; Sscrofa9; 22-AUG-2009 PLAF7 36329 Plasmodium falciparum EnsemblGenomes Ensembl Protists release 2; PlasmoDB_5.5; 22-JUL-2009 PLAL2 521674 Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) Genome Reviews 10-AUG-2010 (Rel. 124, Last updated, Version 1) POLNA 365044 Polaromonas naphthalenivorans (strain CJ2) Genome Reviews 20-MAR-2007 (Rel. 70, Last updated, Version 2) POLNS 452638 Polynucleobacter necessarius (strain STIR1) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 1) POLSJ 296591 Polaromonas sp. (strain JS666 / ATCC BAA-500) EBI 03-JUL-2006 (Rel. 88, Last updated, Version 1) POLSQ 312153 Polynucleobacter sp. (strain QLW-P1DMWA-1) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 2) PONAB 9601 Pongo pygmaeus abelii Ensembl Ensembl v49; PPYG2; 22-FEB-2008 POPTR 3694 Populus trichocarpa JGI Annotation v1.1 (December 2004) based on the assembly release v1.0 PORG3 431947 Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 1) PORGI 242619 Porphyromonas gingivalis Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) PRIPA 54126 Pristionchus pacificus WormBase Wormbase WS196; 31-Oct-2008 PROA2 290512 Prosthecochloris aestuarii (strain DSM 271 / SK 413) Genome Reviews 14-OCT-2008 (Rel. 97, Last updated, Version 1) PROAC 267747 Propionibacterium acnes Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 101) PROCA 9813 Procavia capensis Ensembl ENSEMBL 52; proCap1; 24-NOV-2008 PROM0 167546 Prochlorococcus marinus (strain MIT 9301) EBI 06-MAR-2007 (Rel. 90, Last updated, Version 1) PROM1 167555 Prochlorococcus marinus (strain NATL1A) Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 3) PROM2 93060 Prochlorococcus marinus (strain MIT 9215) Genome Reviews 15-JAN-2008 (Rel. 85, Last updated, Version 2) PROM3 59922 Prochlorococcus marinus (strain MIT 9303) Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 3) PROM4 93059 Prochlorococcus marinus (strain MIT 9211) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 3) PROM5 167542 Prochlorococcus marinus (strain MIT 9515) EBI 21-JAN-2007 (Rel. 90, Last updated, Version 1) PROM9 74546 Prochlorococcus marinus (strain MIT 9312) Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 31) PROMA 167539 Prochlorococcus marinus Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 117) PROMH 529507 Proteus mirabilis (strain HI4320) Genome Reviews 25-NOV-2008 (Rel. 99, Last updated, Version 2) PROMM 74547 Prochlorococcus marinus (strain MIT 9313) NCBI NC_005071.1 GI:33862273 PROMP 59919 Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) PROMS 146891 Prochlorococcus marinus (strain AS9601) EBI 21-JAN-2007 (Rel. 90, Last updated, Version 1) PROMT 59920 Prochlorococcus marinus (strain NATL2A) Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 37) PROVI 290318 Prosthecochloris vibrioformis (strain DSM 265) EBI 01-NOV-2007 (Rel. 93, Last updated, Version 2) PSE14 264730 Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) EBI 14-SEP-2005 (Rel. 85, Last updated, Version 3) PSEA6 342610 Pseudoalteromonas atlantica (strain T6c / BAA-1087) Genome Reviews 14-NOV-2006 (Rel. 62, Last updated, Version 2) PSEA7 381754 Pseudomonas aeruginosa (strain PA7) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 2) PSEA8 557722 Pseudomonas aeruginosa (strain LESB58) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 2) PSEAB 208963 Pseudomonas aeruginosa (strain UCBPP-PA14) EBI 15-NOV-2006 (Rel. 89, Last updated, Version 2) PSEAE 208964 Pseudomonas aeruginosa Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) PSEE4 384676 Pseudomonas entomophila (strain L48) EBI 31-AUG-2006 (Rel. 89, Last updated, Version 3) PSEF5 220664 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) EBI 16-JUL-2005 (Rel. 84, Last updated, Version 2) PSEFS 216595 Pseudomonas fluorescens (strain SBW25) Genome Reviews 07-JUL-2009 (Rel. 108, Last updated, Version 1) PSEHT 326442 Pseudoalteromonas haloplanktis (strain TAC 125) EBI 18-OCT-2005 (Rel. 85, Last updated, Version 3) PSEMY 399739 Pseudomonas mendocina (strain ymp) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 2) PSEP1 351746 Pseudomonas putida (strain F1 / ATCC 700007) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 2) PSEPF 205922 Pseudomonas fluorescens (strain PfO-1) EBI 10-OCT-2005 (Rel. 85, Last updated, Version 1) PSEPG 76869 Pseudomonas putida (strain GB-1) EBI 07-FEB-2008 (Rel. 94, Last updated, Version 1) PSEPK 160488 Pseudomonas putida (strain KT2440) Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) PSEPW 390235 Pseudomonas putida (strain W619) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) PSESM 223283 Pseudomonas syringae pv. tomato Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 120) PSEU2 205918 Pseudomonas syringae pv. syringae (strain B728a) EBI 04-AUG-2005 (Rel. 84, Last updated, Version 3) PSEU5 379731 Pseudomonas stutzeri (strain A1501) Genome Reviews 26-JUN-2007 (Rel. 76, Last updated, Version 2) PSYA2 259536 Psychrobacter arcticus (strain DSM 17307 / 273-4) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 55) PSYCK 335284 Psychrobacter cryohalolentis (strain K5) EBI 19-APR-2006 (Rel. 87, Last updated, Version 1) PSYIN 357804 Psychromonas ingrahamii (strain 37) EBI 23-JAN-2007 (Rel. 90, Last updated, Version 2) PSYWF 349106 Psychrobacter sp. (strain PRwf-1) Genome Reviews 26-FEB-2008 (Rel. 87, Last updated, Version 2) PTEVA 132908 Pteropus vampyrus Ensembl ENSEMBL 51; pteVam1; 21-AUG-2008 PUNMI 488538 Puniceispirillum marinum (strain IMCC1322) Genome Reviews 10-AUG-2010 (Rel. 124, Last updated, Version 1) PYRAB 29292 Pyrococcus abyssi Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 74) PYRAE 178306 Pyrobaculum aerophilum Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) PYRAR 340102 Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) Genome Reviews 26-JUN-2007 (Rel. 76, Last updated, Version 2) PYRCJ 410359 Pyrobaculum calidifontis (strain JCM 11548 / VA1) Genome Reviews 26-JUN-2007 (Rel. 76, Last updated, Version 3) PYRFU 186497 Pyrococcus furiosus Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 81) PYRHO 53953 Pyrococcus horikoshii Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 81) PYRIL 384616 Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 3) PYRKO 311400 Thermococcus kodakaraensis EBI 16-APR-2005 (Rel. 83, Last updated, Version 3) RABIT 9986 Oryctolagus cuniculus Ensembl Ensembl v40; RABBIT; 30-JUL-2006 RALME 266264 Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) EBI 29-APR-2006 (Rel. 87, Last updated, Version 2) RALP1 428406 Ralstonia pickettii (strain 12D) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 7) RALPJ 402626 Ralstonia pickettii (strain 12J) Genome Reviews 25-NOV-2008 (Rel. 99, Last updated, Version 2) RALSO 267608 Ralstonia solanacearum Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) RATNO 10116 Rattus norvegicus Ensembl Ensembl 55; RGSC3.4; 16-JUN-2009 RENSM 288705 Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 2) RHIE6 491916 Rhizobium etli (strain CIAT 652) Genome Reviews 23-SEP-2008 (Rel. 96, Last updated, Version 1) RHIEC 347834 Rhizobium etli (strain CFN 42 / ATCC 51251) EBI 11-MAR-2006 (Rel. 87, Last updated, Version 3) RHIL3 216596 Rhizobium leguminosarum bv. viciae (strain 3841) EBI 16-MAY-2006 (Rel. 87, Last updated, Version 2) RHILO 381 Rhizobium loti NCBI NC_002678.1 GI:13470324 RHILS 395491 Rhizobium leguminosarum bv. trifolii (strain WSM1325) Genome Reviews 22-DEC-2009 (Rel. 115, Last updated, Version 5) RHILW 395492 Rhizobium leguminosarum bv. trifolii (strain WSM2304) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 6) RHIME 382 Rhizobium meliloti NCBI NC_003047.1 GI:15963753 RHISN 394 Rhizobium sp. (strain NGR234) Genome Reviews 15-JUN-2010 (Rel. 122, Last updated, Version 14) RHOBA 265606 Rhodopirellula baltica NCBI NC_005027.1 GI:32470666 RHOCS 414684 Rhodospirillum centenum (strain ATCC 51521 / SW) Genome Reviews 10-FEB-2009 (Rel. 102, Last updated, Version 2) RHOE4 234621 Rhodococcus erythropolis (strain PR4 / NBRC 100887) Genome Reviews 07-JUL-2009 (Rel. 108, Last updated, Version 2) RHOFD 338969 Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) EBI 13-MAR-2006 (Rel. 87, Last updated, Version 1) RHOOB 632772 Rhodococcus opacus (strain B4) Genome Reviews 16-JUN-2009 (Rel. 107, Last updated, Version 1) RHOP2 316058 Rhodopseudomonas palustris (strain HaA2) EBI 08-FEB-2006 (Rel. 86, Last updated, Version 2) RHOP5 316055 Rhodopseudomonas palustris (strain BisA53) EBI 05-OCT-2006 (Rel. 89, Last updated, Version 1) RHOPA 258594 Rhodopseudomonas palustris Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) RHOPB 316056 Rhodopseudomonas palustris (strain BisB18) EBI 22-MAR-2006 (Rel. 87, Last updated, Version 1) RHOPS 316057 Rhodopseudomonas palustris (strain BisB5) EBI 03-JUL-2006 (Rel. 88, Last updated, Version 1) RHOPT 395960 Rhodopseudomonas palustris (strain TIE-1) Genome Reviews 14-OCT-2008 (Rel. 97, Last updated, Version 1) RHORT 269796 Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) EBI 10-FEB-2006 (Rel. 86, Last updated, Version 2) RHOS1 349101 Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) EBI 27-FEB-2007 (Rel. 90, Last updated, Version 1) RHOS4 272943 Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) EBI 14-OCT-2005 (Rel. 85, Last updated, Version 2) RHOS5 349102 Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) Genome Reviews 04-DEC-2007 (Rel. 84, Last updated, Version 3) RHOSK 557760 Rhodobacter sphaeroides (strain KD131 / KCTC 12085) Genome Reviews 16-JUN-2009 (Rel. 107, Last updated, Version 2) RHOSR 101510 Rhodococcus sp. (strain RHA1) Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 20) RICAE 347255 Rickettsia africae (strain ESF-5) Genome Reviews 22-DEC-2009 (Rel. 115, Last updated, Version 7) RICAH 293614 Rickettsia akari (strain Hartford) Genome Reviews 15-JAN-2008 (Rel. 85, Last updated, Version 2) RICB8 391896 Rickettsia bellii (strain OSU 85-389) Genome Reviews 15-JAN-2008 (Rel. 85, Last updated, Version 2) RICBR 336407 Rickettsia bellii (strain RML369-C) EBI 09-APR-2006 (Rel. 87, Last updated, Version 1) RICCK 293613 Rickettsia canadensis (strain McKiel) Genome Reviews 15-JAN-2008 (Rel. 85, Last updated, Version 2) RICCN 272944 Rickettsia conorii Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 109) RICFE 42862 Rickettsia felis EBI 19-AUG-2005 (Rel. 84, Last updated, Version 2) RICM5 416276 Rickettsia massiliae (strain Mtu5) Genome Reviews 15-JAN-2008 (Rel. 85, Last updated, Version 2) RICPR 272947 Rickettsia prowazekii Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) RICPU 562019 Rickettsia peacockii (strain Rustic) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 5) RICRO 452659 Rickettsia rickettsii (strain Iowa) EBI 18-JAN-2008 (Rel. 94, Last updated, Version 1) RICRS 392021 Rickettsia rickettsii (strain Sheila Smith) Genome Reviews 15-JAN-2008 (Rel. 85, Last updated, Version 2) RICTY 257363 Rickettsia typhi Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 101) ROSCS 383372 Roseiflexus castenholzii (strain DSM 13941 / HLO8) EBI 28-AUG-2007 (Rel. 93, Last updated, Version 1) ROSDO 375451 Roseobacter denitrificans (strain ATCC 33942 / OCh 114) EBI 23-JUN-2006 (Rel. 88, Last updated, Version 1) ROSS1 357808 Roseiflexus sp. (strain RS-1) Genome Reviews 04-DEC-2007 (Rel. 84, Last updated, Version 3) ROTMD 680646 Rothia mucilaginosa (strain DY-18) Genome Reviews 10-AUG-2010 (Rel. 124, Last updated, Version 5) RUBXD 266117 Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) EBI 10-JUN-2006 (Rel. 88, Last updated, Version 1) RUTMC 413404 Ruthia magnifica subsp. Calyptogena magnifica Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 3) SACD2 203122 Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) EBI 20-MAR-2006 (Rel. 87, Last updated, Version 1) SACEN 405948 Saccharopolyspora erythraea (strain NRRL 23338) Genome Reviews 26-JUN-2007 (Rel. 76, Last updated, Version 3) SACVD 471857 Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) Genome Reviews 22-DEC-2009 (Rel. 115, Last updated, Version 2) SALA4 454166 Salmonella agona (strain SL483) Genome Reviews 16-DEC-2008 (Rel. 100, Last updated, Version 3) SALAI 391037 Salinispora arenicola (strain CNS-205) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 1) SALAR 41514 Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 2) SALCH 28901 Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 EBI 15-APR-2005 (Rel. 83, Last updated, Version 3) SALDC 439851 Salmonella dublin (strain CT_02021853) Genome Reviews 16-DEC-2008 (Rel. 100, Last updated, Version 3) SALEP 550537 Salmonella enteritidis PT4 (strain P125109) Genome Reviews 16-DEC-2008 (Rel. 100, Last updated, Version 3) SALG2 550538 Salmonella gallinarum (strain 287/91 / NCTC 13346) Genome Reviews 16-DEC-2008 (Rel. 100, Last updated, Version 3) SALHS 454169 Salmonella heidelberg (strain SL476) Genome Reviews 16-DEC-2008 (Rel. 100, Last updated, Version 3) SALNS 423368 Salmonella newport (strain SL254) Genome Reviews 25-NOV-2008 (Rel. 99, Last updated, Version 2) SALPA 54388 Salmonella paratyphi-a EBI 09-APR-2005 (Rel. 83, Last updated, Version 4) SALPB 272994 Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 2) SALPC 476213 Salmonella paratyphi C (strain RKS4594) Genome Reviews 07-JUL-2009 (Rel. 108, Last updated, Version 2) SALPK 554290 Salmonella paratyphi A (strain AKU_12601) Genome Reviews 25-NOV-2008 (Rel. 99, Last updated, Version 2) SALRD 309807 Salinibacter ruber (strain DSM 13855) EBI 23-DEC-2005 (Rel. 86, Last updated, Version 2) SALSV 439843 Salmonella schwarzengrund (strain CVM19633) Genome Reviews 16-DEC-2008 (Rel. 100, Last updated, Version 3) SALTI 220341 Salmonella typhi Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) SALTO 369723 Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 1) SALTY 99287 Salmonella typhimurium Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 114) SANKS 446469 Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 1) SCHPO 4896 Schizosaccharomyces pombe EnsemblGenomes Ensembl Fungi 4; GeneDB EF 1; 17-FEB-2010 SEBTE 526218 Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) EBI 20-NOV-2009 (Rel. 102, Last updated, Version 1) SERP5 399741 Serratia proteamaculans (strain 568) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 1) SHEAM 326297 Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) EBI 23-DEC-2006 (Rel. 90, Last updated, Version 1) SHEB2 407976 Shewanella baltica (strain OS223) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 2) SHEB5 325240 Shewanella baltica (strain OS155 / ATCC BAA-1091) Genome Reviews 04-DEC-2007 (Rel. 84, Last updated, Version 2) SHEB8 402882 Shewanella baltica (strain OS185) Genome Reviews 04-DEC-2007 (Rel. 84, Last updated, Version 2) SHEB9 399599 Shewanella baltica (strain OS195) NCBI CP000891.1 GI:160858648 SHEDO 318161 Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) Genome Reviews 14-NOV-2006 (Rel. 62, Last updated, Version 1) SHEFN 318167 Shewanella frigidimarina (strain NCIMB 400) Genome Reviews 14-NOV-2006 (Rel. 62, Last updated, Version 1) SHEHH 458817 Shewanella halifaxensis (strain HAW-EB4) Genome Reviews 29-APR-2008 (Rel. 90, Last updated, Version 1) SHELP 323850 Shewanella loihica (strain BAA-1088 / PV-4) EBI 11-MAR-2007 (Rel. 91, Last updated, Version 1) SHEON 70863 Shewanella oneidensis Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 83) SHEPA 398579 Shewanella pealeana (strain ANG-SQ1 / ATCC 700345) NCBI CP000851.1 GI:157844830 SHEPC 319224 Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) Genome Reviews 04-DEC-2007 (Rel. 84, Last updated, Version 2) SHEPW 225849 Shewanella piezotolerans (strain WP3 / JCM 13877) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 3) SHESA 94122 Shewanella sp. (strain ANA-3) EBI 17-NOV-2006 (Rel. 89, Last updated, Version 3) SHESH 425104 Shewanella sediminis (strain HAW-EB3) NCBI CP000821.1 GI:157315515 SHESM 60480 Shewanella sp. (strain MR-4) Genome Reviews 14-NOV-2006 (Rel. 62, Last updated, Version 1) SHESR 60481 Shewanella sp. (strain MR-7) Genome Reviews 14-NOV-2006 (Rel. 62, Last updated, Version 1) SHESW 351745 Shewanella sp. (strain W3-18-1) EBI 04-JAN-2007 (Rel. 90, Last updated, Version 1) SHEWM 392500 Shewanella woodyi (strain ATCC 51908 / MS32) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) SHIB3 344609 Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 2) SHIBS 300268 Shigella boydii serotype 4 (strain Sb227) EBI 10-NOV-2005 (Rel. 85, Last updated, Version 1) SHIDS 300267 Shigella dysenteriae serotype 1 (strain Sd197) EBI 30-NOV-2005 (Rel. 85, Last updated, Version 2) SHIF8 373384 Shigella flexneri serotype 5b (strain 8401) EBI 22-JUL-2006 (Rel. 88, Last updated, Version 1) SHIFL 623 Shigella flexneri NCBI NC_004337.1 GI:24111450 SHISS 300269 Shigella sonnei (strain Ss046) EBI 10-NOV-2005 (Rel. 85, Last updated, Version 2) SILPO 89184 Silicibacter pomeroyi EBI 17-APR-2005 (Rel. 83, Last updated, Version 3) SILST 292414 Silicibacter sp. (strain TM1040) EBI 24-MAY-2006 (Rel. 87, Last updated, Version 1) SINMW 366394 Sinorhizobium medicae (strain WSM419) Genome Reviews 15-JAN-2008 (Rel. 85, Last updated, Version 3) SLAHD 471855 Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 2) SODGM 343509 Sodalis glossinidius (strain morsitans) EBI 27-FEB-2006 (Rel. 86, Last updated, Version 3) SOLUE 234267 Solibacter usitatus (strain Ellin6076) EBI 14-NOV-2006 (Rel. 89, Last updated, Version 2) SORAR 42254 Sorex araneus Ensembl Ensembl 45; sorAra1; 29-MAY-2007 SORBI 4558 Sorghum bicolor JGI Sbi1_4, Filtered Models SORC5 448385 Sorangium cellulosum (strain So ce56) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 2) SPETR 43179 Spermophilus tridecemlineatus Ensembl Ensembl 44; speTri1; 8-APR-2007 SPHAL 117207 Sphingopyxis alaskensis EBI 19-MAY-2006 (Rel. 87, Last updated, Version 1) SPHTD 479434 Sphaerobacter thermophilus (strain DSM 20745 / S 6022) Genome Reviews 05-OCT-2010 (Rel. 125, Last updated, Version 8) SPHWW 392499 Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 2) SPILD 504472 Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) EBI 16-JAN-2010 (Rel. 103, Last updated, Version 1) STAA0 663951 Staphylococcus aureus (strain TW20 / 0582) Genome Reviews 10-AUG-2010 (Rel. 124, Last updated, Version 8) STAA1 418127 Staphylococcus aureus (strain Mu3 / ATCC 700698) Genome Reviews 04-DEC-2007 (Rel. 84, Last updated, Version 2) STAA2 359787 Staphylococcus aureus (strain JH1) EBI 29-JUN-2007 (Rel. 92, Last updated, Version 1) STAA3 367830 Staphylococcus aureus (strain USA300) EBI 24-FEB-2006 (Rel. 86, Last updated, Version 2) STAA8 93061 Staphylococcus aureus (strain NCTC 8325) EBI 17-FEB-2006 (Rel. 86, Last updated, Version 1) STAA9 359786 Staphylococcus aureus (strain JH9) EBI 09-DEC-2007 (Rel. 94, Last updated, Version 2) STAAB 273036 Staphylococcus aureus (strain bovine RF122) EBI 24-NOV-2005 (Rel. 85, Last updated, Version 1) STAAC 93062 Staphylococcus aureus (strain COL) EBI 28-APR-2005 (Rel. 83, Last updated, Version 5) STAAD 681288 Staphylococcus aureus (strain ED98) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 2) STAAE 426430 Staphylococcus aureus (strain Newman) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 2) STAAM 158878 Staphylococcus aureus (strain Mu50 / ATCC 700699) Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) STAAN 158879 Staphylococcus aureus (strain N315) NCBI NC_002745.2 GI:29165615 STAAR 282458 Staphylococcus aureus (strain MRSA252) NCBI NC_002952.2 GI:49482253 STAAS 282459 Staphylococcus aureus (strain MSSA476) NCBI NC_002953.3 GI:49484912 STAAT 451516 Staphylococcus aureus (strain USA300 / TCH1516) EBI 17-NOV-2007 (Rel. 93, Last updated, Version 1) STAAW 196620 Staphylococcus aureus (strain MW2) NCBI NC_003923.1 GI:21281729 STACT 396513 Staphylococcus carnosus (strain TM300) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 8) STAEQ 176279 Staphylococcus epidermidis (strain ATCC 35984 / RP62A) EBI 17-APR-2005 (Rel. 83, Last updated, Version 4) STAES 176280 Staphylococcus epidermidis (strain ATCC 12228) Genome Reviews 22-NOV-2005 (Rel. 40, Last updated, Version 44) STAHD 591019 Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) Genome Reviews 05-OCT-2010 (Rel. 125, Last updated, Version 1) STAHJ 279808 Staphylococcus haemolyticus (strain JCSC1435) EBI 27-JUL-2005 (Rel. 84, Last updated, Version 2) STAMF 399550 Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) Genome Reviews 26-JUN-2007 (Rel. 76, Last updated, Version 2) STANL 446470 Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) Genome Reviews 15-JUN-2010 (Rel. 122, Last updated, Version 1) STAS1 342451 Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) EBI 21-SEP-2005 (Rel. 85, Last updated, Version 4) STRA1 355315 Streptococcus agalactiae serotype Ia EBI 30-SEP-2005 (Rel. 85, Last updated, Version 1) STRA3 211110 Streptococcus agalactiae serotype III Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 117) STRA5 216466 Streptococcus agalactiae (serotype V) NCBI NC_004116.1 GI:22536185 STRAW 227882 Phytoplasma sp. (strain STRAWB1) Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) STRCO 1902 Streptomyces coelicolor NCBI NC_003888.3 GI:32141095 STRDG 486410 Streptococcus dysgalactiae subsp. equisimilis (strain GGS_124) Genome Reviews 03-NOV-2009 (Rel. 113, Last updated, Version 3) STRE4 553482 Streptococcus equi subsp. equi (strain 4047) EBI 27-MAR-2009 (Rel. 100, Last updated, Version 2) STREM 552526 Streptococcus equi subsp. zooepidemicus (strain MGCS10565) Genome Reviews 25-NOV-2008 (Rel. 99, Last updated, Version 2) STRG3 637909 Streptococcus gallolyticus (strain UCN34) Genome Reviews 15-JUN-2010 (Rel. 122, Last updated, Version 2) STRGC 29390 Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) Genome Reviews 26-FEB-2008 (Rel. 87, Last updated, Version 2) STRGG 455632 Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 2) STRM5 391008 Stenotrophomonas maltophilia (strain R551-3) Genome Reviews 25-NOV-2008 (Rel. 99, Last updated, Version 1) STRM9 519441 Streptobacillus moniliformis (strain ATCC 14647 / DSM 12112 / NCTC 10651 / 9901) EBI 18-NOV-2009 (Rel. 102, Last updated, Version 1) STRMK 522373 Stenotrophomonas maltophilia (strain K279a) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 1) STRMN 511691 Streptococcus mutans serotype c (strain NN2025) EBI 02-AUG-2009 (Rel. 101, Last updated, Version 1) STRMU 210007 Streptococcus mutans Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) STRP1 160490 Streptococcus pyogenes serotype M1 Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 114) STRP2 373153 Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) EBI 20-DEC-2006 (Rel. 90, Last updated, Version 2) STRP3 198466 Streptococcus pyogenes serotype M3 Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) STRP4 512566 Streptococcus pneumoniae serotype 19F (strain G54) Genome Reviews 16-DEC-2008 (Rel. 100, Last updated, Version 2) STRP6 301450 Streptococcus pyogenes (serotype M6) EBI 17-APR-2005 (Rel. 83, Last updated, Version 2) STRP7 488221 Streptococcus pneumoniae (strain 70585) Genome Reviews 25-MAY-2010 (Rel. 121, Last updated, Version 14) STRP8 301451 Streptococcus pyogenes (serotype M18) NCBI NC_003485.1 GI:19745201 STRPB 370553 Streptococcus pyogenes serotype M12 (strain MGAS2096) EBI 31-MAY-2006 (Rel. 88, Last updated, Version 2) STRPC 370551 Streptococcus pyogenes serotype M12 (strain MGAS9429) EBI 31-MAY-2006 (Rel. 88, Last updated, Version 2) STRPD 370552 Streptococcus pyogenes serotype M2 (strain MGAS10270) EBI 31-MAY-2006 (Rel. 88, Last updated, Version 2) STRPF 370554 Streptococcus pyogenes serotype M4 (strain MGAS10750) EBI 31-MAY-2006 (Rel. 88, Last updated, Version 2) STRPG 160491 Streptococcus pyogenes serotype M5 (strain Manfredo) Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 3) STRPI 487214 Streptococcus pneumoniae (strain Hungary19A-6) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) STRPJ 561276 Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 9) STRPM 319700 Streptococcus pyogenes serotype M28 EBI 19-AUG-2005 (Rel. 84, Last updated, Version 2) STRPN 170187 Streptococcus pneumoniae Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) STRPS 516950 Streptococcus pneumoniae (strain CGSP14) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 1) STRPZ 471876 Streptococcus pyogenes serotype M49 (strain NZ131) Genome Reviews 16-DEC-2008 (Rel. 100, Last updated, Version 1) STRR6 171101 Streptococcus pneumoniae (strain ATCC BAA-255 / R6) NCBI NC_003098.1 GI:15902044 STRRD 479432 Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) Genome Reviews 25-MAY-2010 (Rel. 121, Last updated, Version 4) STRS2 391296 Streptococcus suis (strain 98HAH33) Genome Reviews 26-JUN-2007 (Rel. 76, Last updated, Version 1) STRS4 568814 Streptococcus suis (strain BM407) Genome Reviews 15-JUN-2010 (Rel. 122, Last updated, Version 12) STRS7 40041 Streptococcus equi subsp. zooepidemicus (strain H70) EBI 27-MAR-2009 (Rel. 100, Last updated, Version 2) STRSE 218494 Streptococcus suis (strain P1/7) Genome Reviews 13-OCT-2009 (Rel. 112, Last updated, Version 2) STRSV 388919 Streptococcus sanguinis (strain SK36) Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 1) STRSW 680198 Streptomyces scabies (strain 87.22) Genome Reviews 22-DEC-2009 (Rel. 115, Last updated, Version 1) STRSX 568813 Streptococcus suis (strain SC84) Genome Reviews 13-OCT-2009 (Rel. 112, Last updated, Version 2) STRSY 391295 Streptococcus suis (strain 05ZYH33) Genome Reviews 26-JUN-2007 (Rel. 76, Last updated, Version 1) STRT1 299768 Streptococcus thermophilus (strain CNRZ 1066) EBI 17-APR-2005 (Rel. 83, Last updated, Version 4) STRT2 264199 Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) EBI 17-APR-2005 (Rel. 83, Last updated, Version 5) STRTD 322159 Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) EBI 04-NOV-2006 (Rel. 89, Last updated, Version 3) STRU0 218495 Streptococcus uberis (strain ATCC BAA-854 / 0140J) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 8) STRZJ 488222 Streptococcus pneumoniae (strain JJA) Genome Reviews 07-JUL-2009 (Rel. 108, Last updated, Version 2) STRZP 488223 Streptococcus pneumoniae (strain P1031) Genome Reviews 16-JUN-2009 (Rel. 107, Last updated, Version 1) STRZT 487213 Streptococcus pneumoniae (strain Taiwan19F-14) Genome Reviews 24-NOV-2009 (Rel. 114, Last updated, Version 5) SULAA 204536 Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) Genome Reviews 13-OCT-2009 (Rel. 112, Last updated, Version 5) SULAC 2285 Sulfolobus acidocaldarius EBI 08-JUL-2005 (Rel. 84, Last updated, Version 1) SULD5 525898 Sulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175) Genome Reviews 15-JUN-2010 (Rel. 122, Last updated, Version 6) SULDN 326298 Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) Genome Reviews 18-MAR-2008 (Rel. 88, Last updated, Version 40) SULIA 427318 Sulfolobus islandicus (strain M.16.27) Genome Reviews 07-JUL-2009 (Rel. 108, Last updated, Version 1) SULID 425944 Sulfolobus islandicus (strain L.D.8.5 / Lassen #2) Genome Reviews 25-MAY-2010 (Rel. 121, Last updated, Version 1) SULIK 426118 Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) Genome Reviews 03-NOV-2009 (Rel. 113, Last updated, Version 4) SULIL 429572 Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) Genome Reviews 07-JUL-2009 (Rel. 108, Last updated, Version 1) SULIM 427317 Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) Genome Reviews 07-JUL-2009 (Rel. 108, Last updated, Version 1) SULIN 419942 Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) Genome Reviews 07-JUL-2009 (Rel. 108, Last updated, Version 1) SULIY 439386 Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) Genome Reviews 07-JUL-2009 (Rel. 108, Last updated, Version 1) SULMS 595499 Sulcia muelleri (strain SMDSEM) Genome Reviews 10-AUG-2010 (Rel. 124, Last updated, Version 12) SULMW 444179 Sulcia muelleri (strain GWSS) Genome Reviews 26-FEB-2008 (Rel. 87, Last updated, Version 2) SULNB 387093 Sulfurovum sp. (strain NBC37-1) Genome Reviews 02-OCT-2007 (Rel. 81, Last updated, Version 2) SULS9 555311 Sulfolobus solfataricus (strain 98/2) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 2) SULSO 273057 Sulfolobus solfataricus Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) SULSY 436114 Sulfurihydrogenibium sp. (strain YO3AOP1) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 1) SULTO 273063 Sulfolobus tokodaii NCBI NC_003106.2 GI:24473558 SYMTH 292459 Symbiobacterium thermophilum Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 101) SYNAS 56780 Syntrophus aciditrophicus (strain SB) EBI 30-JAN-2006 (Rel. 86, Last updated, Version 2) SYNFM 335543 Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) EBI 14-NOV-2006 (Rel. 89, Last updated, Version 2) SYNJA 321327 Synechococcus sp. (strain JA-3-3Ab) EBI 22-MAR-2006 (Rel. 87, Last updated, Version 2) SYNJB 321332 Synechococcus sp. (strain JA-2-3B'a(2-13)) EBI 22-MAR-2006 (Rel. 87, Last updated, Version 2) SYNLT 643648 Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) Genome Reviews 05-OCT-2010 (Rel. 125, Last updated, Version 1) SYNP2 32049 Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 2) SYNP6 269084 Synechococcus sp. (strain PCC 6301) EBI 16-APR-2005 (Rel. 83, Last updated, Version 2) SYNPW 32051 Synechococcus sp. (strain WH7803) Genome Reviews 10-JUL-2007 (Rel. 77, Last updated, Version 1) SYNPX 84588 Synechococcus sp. (strain WH8102) Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 110) SYNR3 316278 Synechococcus sp. (strain RCC307) Genome Reviews 02-OCT-2007 (Rel. 81, Last updated, Version 2) SYNS3 64471 Synechococcus sp. (strain CC9311) Genome Reviews 14-NOV-2006 (Rel. 62, Last updated, Version 1) SYNS9 316279 Synechococcus sp. (strain CC9902) EBI 28-OCT-2005 (Rel. 85, Last updated, Version 1) SYNSC 110662 Synechococcus sp. (strain CC9605) EBI 28-OCT-2005 (Rel. 85, Last updated, Version 1) SYNWW 335541 Syntrophomonas wolfei subsp. wolfei (strain Goettingen) Genome Reviews 14-NOV-2006 (Rel. 62, Last updated, Version 1) SYNY3 1148 Synechocystis sp. (strain PCC 6803) Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) TAEGU 59729 Taeniopygia guttata Ensembl ENSEMBL 54; taeGut3.2.4; 15-APR-2009 TAKRU 31033 Takifugu rubripes Ensembl FUGU 4.0; Ensembl 49; 21-FEB-2008 TARSY 9478 Tarsius syrichta Ensembl ENSEMBL 52; tarSyr1; 26-NOV-2008 TERTT 377629 Teredinibacter turnerae (strain ATCC 39867 / T7901) Genome Reviews 13-OCT-2009 (Rel. 112, Last updated, Version 3) TETNG 99883 Tetraodon nigroviridis Ensembl ENSEMBL 54; TETRAODON8; 15-APR-2009 THASP 85643 Thauera sp. (strain MZ1T) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 6) THEAB 484019 Thermosipho africanus (strain TCF52B) Genome Reviews 16-JUN-2009 (Rel. 107, Last updated, Version 4) THEAC 273075 Thermoplasma acidophilum Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 109) THEAM 633148 Thermosphaera aggregans (strain DSM 11486 / M11TL) Genome Reviews 30-NOV-2010 (Rel. 127, Last updated, Version 4) THEAS 525903 Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) EBI 23-NOV-2009 (Rel. 102, Last updated, Version 1) THECD 471852 Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 1) THEEB 32046 Thermosynechococcus elongatus (strain BP-1) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 107) THEFY 269800 Thermobifida fusca (strain YX) EBI 09-AUG-2005 (Rel. 84, Last updated, Version 1) THEGJ 593117 Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) Genome Reviews 03-NOV-2009 (Rel. 113, Last updated, Version 4) THELT 416591 Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 2) THEM4 391009 Thermosipho melanesiensis (strain BI429 / DSM 12029) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 2) THEMA 243274 Thermotoga maritima Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) THENR 590168 Thermotoga naphthophila (strain ATCC BAA-489 / DSM 13996 / JCM 10882 / RKU-10) Genome Reviews 25-MAY-2010 (Rel. 121, Last updated, Version 4) THENV 444157 Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 2) THEON 523850 Thermococcus onnurineus (strain NA1) Genome Reviews 10-FEB-2009 (Rel. 102, Last updated, Version 1) THEP1 390874 Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 2) THEP3 340099 Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) THEPD 368408 Thermofilum pendens (strain Hrk 5) Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 3) THEPX 399726 Thermoanaerobacter sp. (strain X514) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) THERP 309801 Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 1) THESM 604354 Thermococcus sibiricus (strain MM 739 / DSM 12597) Genome Reviews 03-NOV-2009 (Rel. 113, Last updated, Version 4) THESQ 126740 Thermotoga sp. (strain RQ2) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) THET1 525904 Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) Genome Reviews 15-JUN-2010 (Rel. 122, Last updated, Version 6) THET2 262724 Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 104) THET8 300852 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) Genome Reviews 04-DEC-2007 (Rel. 84, Last updated, Version 59) THETN 273068 Thermoanaerobacter tengcongensis Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) THEVO 273116 Thermoplasma volcanium Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 109) THEYD 289376 Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 15) THICR 317025 Thiomicrospira crunogena (strain XCL-2) EBI 02-NOV-2005 (Rel. 85, Last updated, Version 1) THIDA 292415 Thiobacillus denitrificans (strain ATCC 25259) EBI 05-SEP-2005 (Rel. 85, Last updated, Version 1) THISH 396588 Thioalkalivibrio sp. (strain HL-EbGR7) Genome Reviews 16-JUN-2009 (Rel. 107, Last updated, Version 3) TREDE 243275 Treponema denticola Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 116) TREPA 243276 Treponema pallidum Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) TREPS 455434 Treponema pallidum subsp. pallidum (strain SS14) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 1) TRIAD 10228 Trichoplax adhaerens JGI Grell-BS-1999 v1.0 TRIEI 203124 Trichodesmium erythraeum (strain IMS101) Genome Reviews 14-NOV-2006 (Rel. 62, Last updated, Version 2) TROW8 218496 Tropheryma whipplei (strain TW08/27) NCBI NC_004551.1 GI:28572175 TROWT 203267 Tropheryma whipplei (strain Twist) Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 117) TRYBB 5702 Trypanosoma brucei EBI 06-SEP-2005 (Rel. 85, Last updated, Version 1) TUPBE 37347 Tupaia belangeri Ensembl Ensembl 44; tupBel1; 8-APR-2007 TURTR 9739 Tursiops truncatus Ensembl ENSEMBL 51; turTru1; 20-AUG-2008 UNCMA 351160 Uncultured methanogenic archaeon RC-I EBI 02-MAR-2007 (Rel. 90, Last updated, Version 4) UNCTG 471821 Uncultured termite group 1 bacterium phylotype Rs-D17 Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 2) UREP2 505682 Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) UREPA 273119 Ureaplasma parvum Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 120) UREU1 565575 Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western) Genome Reviews 12-MAY-2009 (Rel. 106, Last updated, Version 6) USTMA 5270 Ustilago maydis BROAD Institute Release 1.0 VEREI 391735 Verminephrobacter eiseniae (strain EF01-2) Genome Reviews 17-APR-2007 (Rel. 72, Last updated, Version 3) VESOH 412965 Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) Genome Reviews 26-JUN-2007 (Rel. 76, Last updated, Version 1) VIBC3 345073 Vibrio cholerae (strain ATCC 39541 / O395) Genome Reviews 26-FEB-2008 (Rel. 87, Last updated, Version 2) VIBCH 243277 Vibrio cholerae Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) VIBCJ 593588 Vibrio cholerae serotype O1 (strain MJ-1236) Genome Reviews 09-FEB-2010 (Rel. 117, Last updated, Version 6) VIBCM 579112 Vibrio cholerae serotype O1 (strain M66-2) Genome Reviews 07-JUL-2009 (Rel. 108, Last updated, Version 1) VIBF1 312309 Vibrio fischeri (strain ATCC 700601 / ES114) EBI 17-APR-2005 (Rel. 83, Last updated, Version 2) VIBFM 388396 Vibrio fischeri (strain MJ11) Genome Reviews 16-DEC-2008 (Rel. 100, Last updated, Version 2) VIBHB 338187 Vibrio harveyi (strain ATCC BAA-1116 / BB120) Genome Reviews 04-DEC-2007 (Rel. 84, Last updated, Version 2) VIBPA 223926 Vibrio parahaemolyticus Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) VIBSL 575788 Vibrio splendidus (strain LGP32) Genome Reviews 16-JUN-2009 (Rel. 107, Last updated, Version 2) VIBVU 216895 Vibrio vulnificus Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) VIBVY 196600 Vibrio vulnificus (strain YJ016) Genome Reviews 11-SEP-2007 (Rel. 80, Last updated, Version 81) VITVI 29760 Vitis vinifera EBI 08-OCT-2007 (Rel. 93, Last updated, Version 2) WIGBR 36870 Wigglesworthia glossinidia brevipalpis Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) WOLPM 66077 Wolbachia pipientis wMel Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 111) WOLPP 570417 Wolbachia pipientis subsp. Culex pipiens (strain wPip) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 1) WOLSU 273121 Wolinella succinogenes Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 117) WOLTR 292805 Wolbachia sp. (subsp. Brugia malayi) (strain TRS) EBI 15-APR-2005 (Rel. 83, Last updated, Version 2) WOLWR 66084 Wolbachia sp. subsp. Drosophila simulans (strain wRi) Genome Reviews 16-JUN-2009 (Rel. 107, Last updated, Version 1) XANAC 190486 Xanthomonas axonopodis pv. citri Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 117) XANC5 316273 Xanthomonas campestris pv. vesicatoria (strain 85-10) EBI 20-OCT-2005 (Rel. 85, Last updated, Version 1) XANC8 314565 Xanthomonas campestris pv. campestris (strain 8004) EBI 18-JUN-2005 (Rel. 84, Last updated, Version 2) XANCB 509169 Xanthomonas campestris pv. campestris (strain B100) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 3) XANCP 190485 Xanthomonas campestris pv. campestris Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) XANOM 342109 Xanthomonas oryzae pv. oryzae (strain MAFF 311018) EBI 26-JAN-2006 (Rel. 86, Last updated, Version 2) XANOP 360094 Xanthomonas oryzae pv. oryzae (strain PXO99A) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 2) XANOR 64187 Xanthomonas oryzae (pv. oryzae) EBI 14-APR-2005 (Rel. 83, Last updated, Version 2) XANP2 78245 Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 1) XENTR 8364 Xenopus tropicalis Ensembl Ensembl v59; JGI4.1; 15-JUL-2010 XYLCX 446471 Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) EBI 23-NOV-2009 (Rel. 102, Last updated, Version 1) XYLF2 405441 Xylella fastidiosa (strain M23) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 1) XYLFA 160492 Xylella fastidiosa Genome Reviews 02-MAR-2010 (Rel. 118, Last updated, Version 118) XYLFM 405440 Xylella fastidiosa (strain M12) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 1) XYLFT 183190 Xylella fastidiosa (strain Temecula1 / ATCC 700964) Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 111) YARLI 4952 Yarrowia lipolytica EBI 17-APR-2005 (Rel. 83, Last updated, Version 6) YEAST 4932 Saccharomyces cerevisiae EnsemblGenomes Ensembl Fungi 4; SGD EF 1; 2-MAR-2010 YERE8 393305 Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) Genome Reviews 20-MAR-2007 (Rel. 70, Last updated, Version 2) YERP1 637385 Yersinia pestis (strain D182038) Genome Reviews 25-MAY-2010 (Rel. 121, Last updated, Version 6) YERP3 349747 Yersinia pseudotuberculosis (serotype O:1b / strain IP 31758) Genome Reviews 05-FEB-2008 (Rel. 86, Last updated, Version 2) YERPA 360102 Yersinia pestis (biovar Antiqua strain Antiqua) Genome Reviews 03-OCT-2006 (Rel. 59, Last updated, Version 2) YERPB 502801 Yersinia pseudotuberculosis serotype IB (strain PB1/+) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 1) YERPD 637382 Yersinia pestis (strain D106004) EBI 06-NOV-2009 (Rel. 102, Last updated, Version 1) YERPE 214092 Yersinia pestis Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 109) YERPG 349746 Yersinia pestis bv. Antiqua (strain Angola) Genome Reviews 02-SEP-2008 (Rel. 95, Last updated, Version 3) YERPN 377628 Yersinia pestis (biovar Antiqua strain Nepal516) Genome Reviews 03-OCT-2006 (Rel. 59, Last updated, Version 2) YERPP 386656 Yersinia pestis (strain Pestoides F) Genome Reviews 26-JUN-2007 (Rel. 76, Last updated, Version 1) YERPS 273123 Yersinia pseudotuberculosis Genome Reviews 01-SEP-2009 (Rel. 110, Last updated, Version 95) YERPY 502800 Yersinia pseudotuberculosis serotype O:3 (strain YPIII) Genome Reviews 01-JUL-2008 (Rel. 93, Last updated, Version 2) ZYMMO 542 Zymomonas mobilis EBI 14-APR-2005 (Rel. 83, Last updated, Version 3)